Replicate	Repeat family	Number of mapped reads
1	LINE-1	15,930,866
	LINE-2	56
	ERV1	1,049,021
	ERVK	14,783,904
	MERVL	1,275,515
	Major Satellites	305,524
	Minor Satellites	3
	Ribosomal RNA (rRNA)	773
	SINE Alu B1	398,331
	SINE B2	4,583,807
	SINE B4	464,024
	Telomeric repeats	447
2	LINE-1	14,790,530
	LINE-2	86
	ERV1	1,159,969
	ERVK	13,299,950
	MERVL	1,382,105
	Major Satellites	318,816
	Minor Satellites	2
	Ribosomal RNA (rRNA)	846
	SINE Alu B1	457,910
	SINE B2	5,341,151
	SINE B4	533,479
	Telomeric repeats	507
3	LINE-1	9,769,600
	LINE-2	43
	ERV1	952,484
	ERVK	8,865,749
	MERVL	1,049,799
	Major Satellites	173,969
	Minor Satellites	4
	Ribosomal RNA (rRNA)	551
	SINE Alu B1	370,782
	SINE B2	4,226,418
	SINE B4	427,651
	Telomeric repeats	394