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. Author manuscript; available in PMC: 2020 Jul 27.
Published in final edited form as: J Surg Oncol. 2011 Dec;104(8):865–873. doi: 10.1002/jso.21945

TABLE II.

Summary of the Most Important Tumor Entities in the Differential Diagnosis of GIST

Tumor entity Preferential site in GI tract Patient demographics Key pathologic features contrasting with GIST
Leiomyoma (intramural) Esophagus, rare elsewhere Young adults, also older Eosinophilic spindle cells with immunohistochemical positivity for smooth muscle markers and negativity for KIT and anoctamin 1
Leiomyoma (of muscularis mucosae Colon and rectum Old adults Small mucosal polyp. Tumor cells histologically similar to intramural leiomyoma
Leiomyoma, Mullerian type Colon, also in the abdominal cavity Middle-aged women Estrogen and progesterone receptor-positive leiomyomas (low mitotic activity and atypia), comparable to uterine smooth muscle tumors and representing their extrauterine counterparts
Leiomyosarcoma Relatively most common in colon, occurs at all sites Old adults Similar to leiomyoma, but contains nuclear atypia and mitotic activity. Negative for KIT and anoctamin 1. Positive for smooth muscle markers, desmin-positivity may vary
Glomus tumor Stomach, nearly exclusively Adults, marked female predominance Round tumor cells with variably eosinophilic tumor cells. Positive for smooth muscle actin and negative for KIT
Schwannoma Stomach, colon, rare in small intestine and elsewhere Older adults Spindle cells forming microtrabeculae or microfascicles. Tumor cells immunohistochemically positive for S100 protein and GFAP and negative for KIT and anoctamin 1.
Inflammatory myofibroblastic tumor All segments of GI-tract, also other abdominal sites Infants, children and young adults Elongated, cytoplasm-rich spindle cells interspersed with lymphocytes and plasma cells. Typically positive for ALK and ALK-gene rearrangement by fluoresce in situ hybridization (FISH). Negative for KIT and anoctamin 1.
Inflammatory fibroid polyp Small intestine, stomach, rare elsewhere All ages, rare in children Polypoid intraluminal mass, often in terminal ileum causing intussusception, or a small gastric polyp. Epithelioid to spindled lesional cells in a loose myxofibrous matrix with abundant capillaries. Contains eosinophils and mixed inflammatory cells. KIT negative.
Desmoid fibromatosis Stomach and intestines From young adulthood on Moderately cellular, collagenous to myxoid spindle cell tumor. KIT negative. Nuclear positivity for beta-catenin is common
Synovial sarcoma Stomach Varies Cellular spindle cell tumor, may involve mucosa or be transmural. Keratin-positive component, negative for KIT
Dedifferentiated liposarcoma Intra-abdominal space, but may also involve intestines Middle-aged to old adults Spindle cell tumor with various appearances. Can simulate other tumors such as GIST, smooth muscle tumors, and fibromatosis. Negative for KIT and anoctamin 1. Often shows nuclear positivity for MDM2