Table 9.
Major groove dimensions of putative plant class C enzymes (n = 39)
| Sequence ID | Organism | rGH9 | hGH9 | lGH9 | rCBM49 | hCBM49 | lCBM49 |
|---|---|---|---|---|---|---|---|
| orange1.1g043219m | Citrus sinensis | 13.60 | 3.50 | 170.78 | 11.29 | 4.40 | 141.76 |
| ppa022524m | Prunus persica | 11.65 | 3.71 | 146.38 | 13.29 | 4.06 | 166.87 |
| SapurV1A.0237s0330.1.p | Salix purpurea | 13.68 | 3.74 | 171.84 | 6.09 | 3.73 | 76.50 |
| Carubv10003874m | Capsella rubella | 13.50 | 3.28 | 169.59 | 10.11 | 3.90 | 126.99 |
| Pavir.Eb00189.1.p | Panicum virgatum | 13.55 | 3.53 | 170.15 | 8.76 | 4.06 | 110.04 |
| Bradi5g026010.1.p | Bradipodium distachyon | 9.79 | 3.64 | 123.02 | 14.46 | 4.08 | 181.58 |
| Brara.E01714.1.p | Brassica rapa | 8.06 | 4.00 | 101.18 | 10.23 | 4.28 | 128.52 |
| Pavir.Ea00142.1.p | Panicum virgatum | 12.12 | 3.66 | 152.23 | 6.31 | 2.70 | 79.25 |
| GRMZM2G143747_P01 | Zea mays | 15.45 | 3.32 | 194.11 | 9.71 | 4.61 | 121.95 |
| SapurV1A.0035s0560.1.p | Salix purpurea | 14.64 | 3.47 | 183.88 | 8.48 | 3.78 | 106.56 |
| Bradi2g07150.1.p | Bradipodium distachyon | 13.45 | 3.94 | 168.96 | – | – | – |
| PGSC0003DMP400021750 | Solanum tuberosum | 14.02 | 3.50 | 176.10 | 9.77 | 2.94 | 122.77 |
| Migut.D01909.1.p | Mimulus guttatus | 10.15 | 3.26 | 127.54 | 11.60 | 4.19 | 145.69 |
| 234652 | Selaginella moellendorffii | 9.30 | 4.07 | 116.79 | 10.93 | 4.09 | 137.30 |
| MDP0000131267 | Malus domestica | 12.20 | 3.81 | 153.26 | 8.13 | 4.22 | 102.16 |
| Potri.001G092200.1 | Populus trichocarpa | 12.44 | 3.79 | 156.30 | 9.47 | 3.20 | 118.92 |
| GRMZM2G453565_P01 | Zea mays | 12.86 | 3.71 | 161.55 | 7.27 | 4.68 | 91.25 |
| Solyc02g014220.2.1 | Solanum lycopersicum | 8.73 | 3.05 | 109.64 | 9.66 | 4.43 | 121.38 |
| Aquca_037_00141.1 | Aquilegia coerulea | 12.83 | 3.96 | 161.16 | 6.80 | 2.67 | 85.35 |
| Glyma.05G216400.1.p | Glycine max | 13.34 | 3.68 | 167.55 | 5.91 | 3.24 | 74.26 |
| 489943 | Arabidopsis lyrata | 12.62 | 3.74 | 158.53 | 14.59 | 3.44 | 183.19 |
| Bostr.25463s0223.1.p | Boechera stricta | 13.46 | 3.67 | 169.11 | 12.65 | 3.65 | 158.85 |
| Eucgr.J00862.1 | Eucalyptus grandis | 9.11 | 4.41 | 114.46 | 12.83 | 3.54 | 161.13 |
| ppa002939m | Prunus persica | 14.83 | 3.79 | 186.22 | 8.16 | 3.85 | 102.47 |
| PGSC0003DMP400034548 | Solanum tuberosum | 8.54 | 3.40 | 107.32 | 8.66 | 3.21 | 108.72 |
| Thhalv10028514m | Eutrema salsugineum | 13.92 | 3.71 | 174.81 | 13.35 | 3.97 | 167.66 |
| Medtr4g074960.1 | Medicago truncatula | 9.77 | 3.75 | 122.77 | 8.91 | 4.48 | 111.90 |
| Gorai.005G210200.1 | Gossypium raimondii | 11.43 | 3.57 | 143.52 | 10.27 | 3.78 | 128.96 |
| Potri.003G139600.1 | Populus trichocarpa | 13.60 | 3.89 | 170.81 | 7.71 | 3.66 | 96.86 |
| Sobic.003G015700.1.p | Sorghum bicolor | 13.31 | 3.57 | 167.13 | 10.85 | 3.60 | 136.29 |
| Brara.I01325.1.p | Brassica rapa | 13.90 | 3.84 | 174.63 | 6.05 | 3.10 | 75.93 |
| Cucsa.107370.1 | Cucumis sativus | 14.22 | 4.11 | 178.58 | 12.41 | 4.04 | 155.86 |
| 99802 | Selaginella moellendorffii | 9.71 | 4.13 | 122.00 | 8.00 | 4.70 | 100.49 |
| Brara.C02656.1.p | Brassica rapa | 13.86 | 3.68 | 174.09 | 12.82 | 3.95 | 160.97 |
| Lus10032377 | Linum usitatissimum | 12.70 | 3.99 | 159.48 | 7.76 | 3.98 | 97.44 |
| Lus10003888 | Linum usitatissimum | 12.45 | 4.17 | 156.38 | 6.27 | 2.83 | 78.77 |
| Medtr8g099410.1 | Medicago truncatula | 13.71 | 3.81 | 172.20 | 7.92 | 3.04 | 99.49 |
| AT4G11050.1 | Arabidopsis thaliana | 13.53 | 3.84 | 169.89 | 12.86 | 4.03 | 161.55 |
| Bradi2g32270.1.p | Bradipodium distachyon | 14.21 | 3.61 | 178.47 | 5.64 | 2.68 | 70.88 |
r, radius of approximating cylinder (Ang); h, height of approximating cylinder (Ang); l, length of wide groove (Ang); GH9, glycoside hydrolase 9; CBM49, carbohydrate binding module