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. 2020 Apr-Jun;12(2):74–85. doi: 10.32607/actanaturae.10864

Table 1.

Model RNA substrates used in this study

RNA substrate, designation Nucleotide sequence
HP1 5′ FAM-r(AUAUAAGAUUAUAU)-BHQ1 3′
HP2 5′ FAM-r(AUAUAAGAAUUAUAU)-BHQ1 3′
HP3 5′ FAM-r(AUAUAAGAUAUUAUAU)-BHQ1 3′
HP4 5′ FAM-r(AUAUAAGAUCAUUAUAU)-BHQ1 3′
HP5 5′ FAM-r(AUACAACAUAAUUGUAU)-BHQ1 3′
HP6 5′ FAM-r(AUAUAACAUCAUUAUAU)-BHQ1 3′
L 5′ FAM-r(AGAGAGGCAGAGA) 3′

Note.

FAM – 6-carboxyfluorescein label; BHQ1 –black hole quencher.

BHQ1 – black hole quencher.