Table 1.
Summary of genome sequencing and annotation metrics
Strains: 1, Tepidimonas alkaliphilus YIM 72238T (VJNB00000000); 2, Tepidimonas aquatica CLN-1T (VJNA00000000); 3, Tepidimonas fonticaldi AT-A2T (VJOO00000000); 4, PL17 (GCF_001675355.1); 5, Tepidimonas ignava SPS-1037T (VJNC00000000); 6, Tepidimonas sediminis YIM 72259T (VJND00000000); 7, SPSP-6T (VJON00000000); 8, Tepidimonas taiwanensis I1-1T (VJOM00000000); 9, MB2 (GCF_001481285.1); 10, VT154-175 (GCF_000807215.1); 11, Tepidimonas thermarum AA-1T (VJOL00000000).
|
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
|
|---|---|---|---|---|---|---|---|---|---|---|---|
|
Assembled genome size (bp) |
2 465 445 |
2 672 904 |
3 009 257 |
2 740 548 |
2 715 700 |
2 533 936 |
2 808 982 |
2 859 782 |
2 813 615 |
2 924 885 |
2 703 753 |
|
DNA G+C content (%) |
69.01 |
68.55 |
69.00 |
69.53 |
68.79 |
71.83 |
66.63 |
68.80 |
68.80 |
68.66 |
68.70 |
|
Protein-coding genes |
2280 |
2507 |
2758 |
2519 |
2563 |
2337 |
2634 |
2622 |
2591 |
2658 |
2552 |
|
Genes with function prediction |
2049 |
2256 |
2407 |
2290 |
2217 |
2141 |
2208 |
2310 |
2291 |
2362 |
2260 |
|
Ribosomal genes (5S, 16S, 23S) |
1, 1, 1 |
2, 2, 2 |
2, 2, 2 |
2, 1, 1 |
2, 2, 2 |
2, 1, 1 |
2, 2, 2 |
2, 2, 2 |
2, 2, 2 |
4, 4, 4 |
2, 2, 2 |
|
Estimated genome completeness (%) |
99.51 |
99.53 |
100 |
99.53 |
99.53 |
99.07 |
99.14 |
99.42 |
99.42 |
98.91 |
98.91 |
|
Estimated contamination (%) |
0.00 |
0.96 |
0.00 |
1.17 |
0.03 |
0.15 |
1.05 |
0.03 |
0.18 |
0.05 |
0.47 |