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. 2020 Jul 28;10:12574. doi: 10.1038/s41598-020-68728-2

Table 3.

List of genes most differentially reduced expressed in R. solani AG3-PT isolate Ben3 between 3 and 8 dpi.

graphic file with name 41598_2020_68728_Tab3_HTML.jpg

Log2fold change: calculated with the DESeq2 package as implemented in the ReadXplorer software.

Mean RPKM: average RPKM calculated with DESeq2 for both timepoints.

Description: Putative functions based on BLAST2GO protein BLAST. Blue, gene product involved in nitrogen uptake and assimilation; green, involved in protein degradation; orange, involved in polysaccharide degradation; grey, hypothetical protein.