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. 2020 Jul 9;71(Suppl 2):S84–S90. doi: 10.1093/cid/ciaa498

Table 2.

Pathogen Detection Methods and Their Technical Characteristics

Detection Method Limit of Detection Recovery Efficiency, % Dynamic Range Time to Answer, h Absolute or Relative Quantification Trained Personnel Required Tests at Species Level Ready for Field Test Reference
A1 NA Up to 50% ~500 cells 2 wk Relative Yes No No [14]
A2 103 cells/mL−1 NA 103–106 cells/mL−1 0.25 Absolute No No Yes [16, 17]
A3 103 cells/mL−1 NA ~103 cells/mL−1 0.25 Absolute No No Yes [18]
A4 103 CFU/mL−1 NA 103–106 CFU/mL−1 0 Relative Yes No No [20]
A5 1.4 × 103 CFU/mL−1 NA 7 × 105 to 1 × 104 CFU/mL−1 0 Relative Yes No Yes [21]
A6 1.6 × 102 particles/mL−1 NA 1.6 × 102–5 × 106 particles/mL−1 10 Relative No No Yes [22]
B1 12 CFU/mL−1 97.4–100.6 NA 1.5 Relative No Yes No [23]
B2 3 copies/μL−1 NA 3–3000 copies/μL−1 1.2 Relative No Yes Yes [24]
3 copies/μL−1 3–3000 copies/μL−1
2 copies/μL−1 2–2000 copies/μL−1
3 copies/μL−1 3–3000 copies/μL−1
B3 3 × 10−5 ng/μL−1 or 2.7 × 104 CFU/mL−1 NA 3 × 10−5–3 × 100 ng/μL−1 1 Relative No Yes Yes [25]
B4 11 copies/μL−1 NA 11–1.1 × 105 copies/μL−1 1 Absolute No Yes Yes [26]
B5 0.3 cells/mL−1 99.9 0.3–10 000 cells/mL−1 1 Absolute No Yes Yes [27]
3 cells/mL−1 NA 3–10 000 cells/mL−1
B6 0.7 PFU per reaction NA 1–1000 PFU per reaction 0.5 Absolute No Yes Yes [28]
C1 31 CFU/mL−1 96–104 40–4 × 108 CFU/mL−1 0.33 Relative No Yes Yes [29]
C2 1.9 × 103 CFU/mL−1 NA 103–106 CFU/mL−1 0.75 Relative Yes No Yes [30]
C3 102 CFU/mL−1 8.84–21.3 NA 1.5 Relative Yes Yes Yes [31]
C4 50 CFU/mL−1 NA 50–107 CFU/mL−1 0.53 Relative No Yes Yes [32]
C5 102 CFU/mL−1 45.4–80.2 102–106 CFU/mL−1 2 Relative Yes Yes Yes [33]
C6 1 CFU/mL−1 101–112.1 5–105 CFU/mL−1 2 Relative Yes Yes Yes [34]

Abbreviations: CFU, colony-forming units; NA, not available; PFU, plaque-forming units.