Table 1.
Significantly changed proteins for M. hominis growing in different growth conditions. Log2FC – logarithm of fold change ratio for growth with thymidine to growth with arginine.
| Accession | Log2FC | P value adj. | Description |
|---|---|---|---|
| WP_012855601.1 | 1.77 | 0.010 | hypothetical protein |
| WP_012855692.1 | 1.71 | 0.021 | pyruvate kinase |
| WP_012855537.1 | 1.56 | 0.013 | hypothetical protein |
| WP_012855507.1 | 1.47 | 0.010 | transcriptional regulator MraZ |
| WP_012855710.1 | 1.44 | 0.006 | ABC transporter ATP-binding protein |
| WP_012855796.1 | 1.27 | 0.014 | 30S ribosome-binding factor RbfA |
| WP_012855529.1 | 1.11 | 0.005 | N(G) N(G)-dimethylarginine dimethylaminohydrolase |
| WP_012855730.1 | 1.06 | 0.029 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE |
| WP_012855297.1 | 1.05 | 0.038 | chaperone protein ClpB |
| WP_012855435.1 | 0.99 | 0.048 | hypothetical protein |
| WP_012855457.1 | 0.92 | 0.008 | NAD(+) synthase |
| WP_012855371.1 | 0.88 | 0.033 | hypothetical protein |
| WP_012855709.1 | 0.88 | 0.008 | hypothetical protein |
| WP_012855608.1 | 0.84 | 0.008 | thymidine phosphorylase |
| WP_012855370.1 | 0.83 | 0.037 | NUDIX domain-containing protein |
| WP_012855640.1 | 0.80 | 0.005 | DUF885 domain-containing protein |
| WP_012855422.1 | 0.78 | 0.026 | 30S ribosomal protein S12 |
| WP_012855390.1 | 0.74 | 0.048 | single-stranded DNA-binding protein |
| WP_012855783.1 | 0.74 | 0.021 | type I glyceraldehyde-3-phosphate dehydrogenase |
| WP_012855759.1 | 0.67 | 0.032 | serine/threonine-protein phosphatase |
| WP_012855649.1 | 0.64 | 0.010 | protein LemA |
| WP_012855632.1 | 0.64 | 0.008 | lactate dehydrogenase |
| WP_012855504.1 | 0.63 | 0.008 | cell division protein FtsZ |
| WP_012855582.1 | −0.61 | 0.033 | leucine–tRNA ligase |
| WP_012855330.1 | −0.61 | 0.009 | Lmp1 protein |
| WP_012855717.1 | −0.62 | 0.036 | GTPase Era |
| WP_012855408.1 | −0.62 | 0.008 | alanine–tRNA ligase |
| WP_012855532.1 | −0.63 | 0.037 | XRE family transcriptional regulator |
| WP_012855641.1 | −0.63 | 0.010 | oligoendopeptidase F |
| WP_012855592.1 | −0.64 | 0.008 | hypothetical protein |
| WP_012855418.1 | −0.65 | 0.018 | RluA family pseudouridine synthase |
| WP_012855433.1 | −0.65 | 0.035 | rRNA pseudouridine synthase |
| WP_012855356.1 | −0.67 | 0.021 | hypothetical protein |
| WP_012855477.1 | −0.69 | 0.023 | NAD-dependent DNA ligase LigA |
| WP_012855316.1 | −0.70 | 0.022 | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
| WP_012855626.1 | −0.70 | 0.022 | ABC transporter ATP-binding protein |
| WP_012855757.1 | −0.70 | 0.048 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD |
| WP_012855399.1 | −0.71 | 0.024 | TlyA family rRNA (cytidine-2′-O)-methyltransferase |
| WP_012855628.1 | −0.72 | 0.008 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG |
| WP_012855539.1 | −0.72 | 0.040 | DegV family EDD domain-containing protein |
| WP_012855668.1 | −0.73 | 0.021 | YihA family ribosome biogenesis GTP-binding protein |
| WP_012855402.1 | −0.73 | 0.003 | DNA polymerase IV |
| WP_012855542.1 | −0.73 | 0.048 | DNA-directed RNA polymerase subunit beta' |
| WP_012855470.1 | −0.73 | 0.026 | deoxyguanosine kinase |
| WP_012855471.1 | −0.73 | 0.021 | hypoxanthine phosphoribosyltransferase |
| WP_020002555.1 | −0.74 | 0.021 | DUF402 domain-containing protein |
| WP_012855437.1 | −0.74 | 0.023 | peptide chain release factor 1 |
| WP_041359585.1 | −0.76 | 0.011 | hypothetical protein |
| WP_012855413.1 | −0.77 | 0.037 | tRNA1(Val) (adenine(37)-N6)-methyltransferase |
| WP_012855453.1 | −0.77 | 0.016 | alcohol dehydrogenase |
| WP_012855553.1 | −0.78 | 0.008 | type I methionyl aminopeptidase |
| WP_012855662.1 | −0.81 | 0.008 | RpiB/LacA/LacB family sugar-phosphate isomerase |
| WP_012855625.1 | −0.81 | 0.037 | hypothetical protein |
| WP_012855642.1 | −0.82 | 0.037 | adenine phosphoribosyltransferase |
| WP_080569061.1 | −0.82 | 0.026 | hypothetical protein |
| WP_012855743.1 | −0.85 | 0.024 | ribonuclease III |
| WP_012855497.1 | −0.85 | 0.004 | ribosome biogenesis GTPase YlqF |
| WP_012855518.1 | −0.85 | 0.035 | hypothetical protein |
| WP_012855403.1 | −0.85 | 0.010 | nicotinate (nicotinamide) nucleotide adenylyltransferase |
| WP_012855376.1 | −0.86 | 0.008 | DNA polymerase III subunit |
| WP_012855694.1 | −0.86 | 0.003 | exodeoxyribonuclease V subunit alpha |
| WP_012855699.1 | −0.87 | 0.010 | tRNA (guanosine(46)-N7)-methyltransferase TrmB |
| WP_012855514.1 | −0.88 | 0.032 | RNA methyltransferase |
| WP_012855721.1 | −0.91 | 0.026 | spermidine/putrescine ABC transporter permease |
| WP_012855655.1 | −0.92 | 0.017 | 2 3-bisphosphoglycerate-independent phosphoglycerate mutase |
| WP_012855740.1 | −0.94 | 0.033 | hypothetical protein |
| WP_012855290.1 | −0.94 | 0.028 | TatD family deoxyribonuclease |
| WP_012855419.1 | −0.96 | 0.011 | hypothetical protein |
| WP_012855591.1 | −0.96 | 0.028 | hypothetical protein |
| WP_012855323.1 | −0.98 | 0.010 | hypothetical protein |
| WP_012855798.1 | −0.99 | 0.023 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH |
| WP_012855725.1 | −0.99 | 0.011 | RDD family protein |
| WP_080569060.1 | −0.99 | 0.015 | hypothetical protein |
| WP_012855552.1 | −1.00 | 0.019 | translation initiation factor IF-1 |
| WP_012855289.1 | −1.02 | 0.018 | ribosomal RNA small subunit methyltransferase A |
| WP_012855634.1 | −1.02 | 0.044 | hypothetical protein |
| WP_012855765.1 | −1.05 | 0.028 | hypothetical protein |
| WP_012855334.1 | −1.08 | 0.026 | hypothetical protein |
| WP_012855502.1 | −1.09 | 0.008 | 16S rRNA (uracil(1498)-N(3))-methyltransferase |
| WP_012855595.1 | −1.11 | 0.010 | putative immunoglobulin-blocking virulence protein |
| WP_041359577.1 | −1.11 | 0.024 | hypothetical protein |
| WP_012855512.1 | −1.13 | 0.017 | tRNA pseudouridine(55) synthase TruB |
| WP_012855378.1 | −1.26 | 0.023 | 30S ribosomal protein S20 |
| WP_012855580.1 | −1.30 | 0.021 | signal peptidase II |
| WP_012855576.1 | −1.33 | 0.023 | hypothetical protein |
| WP_012855409.1 | −1.36 | 0.033 | Holliday junction resolvase RuvX |
| WP_012855438.1 | −1.53 | 0.023 | peptide chain release factor N(5)-glutamine methyltransferase |
| WP_012855523.1 | −1.69 | 0.008 | hypothetical protein |
| WP_012855355.1 | −1.74 | 0.037 | hypothetical protein |
| WP_012855495.1 | −1.89 | 0.001 | signal recognition particle protein |
| WP_012855794.1 | −2.05 | 0.011 | DUF448 domain-containing protein |
| WP_012855696.1 | −2.49 | 0.017 | tRNA lysidine(34) synthetase TilS |
| WP_012855645.1 | −2.55 | 0.005 | hypothetical protein |
| WP_012855350.1 | −3.49 | 0.017 | hypothetical protein |