TABLE 2.
Sample | Begomovirus/deltasatellite | Genome component | Isolate | Restriction enzyme | Size (nt) | GenBank acc. no. |
679 | DesLDV | DNA-A | CU-Co679-1-13 | SacI | 2569 | MF773881 |
DesLDV | DNA-A | CU-Co679-2-13 | BamHI | 2570 | MF773882 | |
DesLDV | DNA-B | CU-Co679-1-13 | SacI | 2497 | MF773891 | |
DesLDV | DNA-B | CU-Co679-2-13 | SacI | 2497 | MF773892 | |
680 | DesLDV | DNA-A | CU-Co680-1-13 | SacI | 2570 | MF773883 |
DesLDV | DNA-A | CU-Co680-2-13 | SacI | 2570 | MF773884 | |
DesLDV | DNA-A | CU-Co680-3-13 | SacI | 2569 | MF773885 | |
DesLDV | DNA-B | CU-Co680-1-13 | SacI | 2498 | MF773893 | |
DesLDV | DNA-B | CU-Co680-2-13 | SacI | 2497 | MF773894 | |
DesLDV | DNA-B | CU-Co680-3-13 | EcoRI | 2498 | MF773895 | |
DesLDV | DNA-B | CU-Co680-4-13 | EcoRI | 2498 | MF773896 | |
DesLDV | DNA-B | CU-Co680-5-13 | EcoRI | 2498 | MF773897 | |
ToYLDD2 | CU-Co680-S8-13 | SacI | 692 | MF773917 | ||
ToYLDD2 | CU-Co680-S11-13 | SacI | 692 | MF773918 | ||
ToYLDD2 | CU-Co680-S17-13 | SacI | 692 | MF773919 | ||
704 | DesLDV | DNA-A | CU-Co704-1-13 | SacI | 2570 | MF773886 |
DesLDV | DNA-A | CU-Co704-2-13 | SacI | 2570 | MF773887 | |
DesLDV | DNA-B | CU-Co704-1-13 | HindIII | 2499 | MF773898 | |
DesLDV | DNA-B | CU-Co704-2-13 | HindIII | 2499 | MF773899 | |
DesLDV | DNA-B | CU-Co704-3-13 | HindIII | 2499 | MF773900 | |
DesLDV | DNA-B | CU-Co704-4-13 | SacI | 2498 | MF773901 | |
DesLDD | CU-Co704-H1-13 | HindIII | 666 | MF773920 | ||
DesLDD | CU-Co704-H6-13 | HindIII | 666 | MF773921 | ||
DesLDD | CU-Co704-H7-13 | HindIII | 666 | MF773922 | ||
DesLDD | CU-Co704-H8-13 | HindIII | 666 | MF773923 | ||
DesLDD | CU-Co704-H9-13 | HindIII | 666 | MF773924 | ||
DesLDD | CU-Co704-H10-13 | HindIII | 666 | MF773925 | ||
705 | DesLDV | DNA-A | CU-Co705-1-13 | SacI | 2569 | MF773888 |
DesLDV | DNA-B | CU-Co705-1-13 | EcoRI | 2531 | MF773902 | |
DesLDV | DNA-B | CU-Co705-2-13 | SacI | 2530 | MF773903 | |
DesLDV | DNA-B | CU-Co705-3-13 | EcoRI | 2531 | MF773904 | |
DesLDV | DNA-B | CU-Co705-4-13 | SacI | 2530 | MF773905 | |
DesLDV | DNA-B | CU-Co705-5-13 | EcoRI | 2531 | MF773906 | |
DesLDV | DNA-B | CU-Co705-6-13 | SacI | 2531 | MF773907 | |
DesLDV | DNA-B | CU-Co705-7-13 | SacI | 2530 | MF773908 | |
DesLDV | DNA-B | CU-Co705-8-13 | EcoRI | 2531 | MF773909 | |
CoYVCUV | CU-Co705-1-13 | EcoRI | 2576 | MF773912 | ||
CoYVCUV | CU-Co705-2-13 | EcoRI | 2576 | MF773913 | ||
CoYVCUV | CU-Co705-3-13 | SacI | 2576 | MF773914 | ||
CoYVCUV | CU-Co705-4-13 | SacI | 2576 | MF773915 | ||
DesLDD | CU-Co705-H1-13 | HindIII | 666 | MF773926 | ||
DesLDD | CU-Co705-H2-13 | HindIII | 665 | MF773927 | ||
DesLDD | CU-Co705-H3-13 | HindIII | 666 | MF773928 | ||
DesLDD | CU-Co705-H4-13 | HindIII | 665 | MF773929 | ||
DesLDD | CU-Co705-H5-13 | HindIII | 665 | MF773930 | ||
DesLDD | CU-Co705-H6-13 | HindIII | 665 | MF773931 | ||
DesLDD | CU-Co705-H7-13 | HindIII | 665 | MF773932 | ||
DesLDD | CU-Co705-H8-13 | HindIII | 665 | MF773933 | ||
DesLDD | CU-Co705-H11-13 | HindIII | 666 | MF773934 | ||
706 | DesLDV | DNA-A | CU-Co706-1-13 | SacI | 2570 | MF773889 |
DesLDV | DNA-A | CU-Co706-2-13 | SacI | 2570 | MF773890 | |
DesLDV | DNA-B | CU-Co706-1-13 | SacI | 2530 | MF773910 | |
DesLDV | DNA-B | CU-Co706-2-13 | SacI | 2531 | MF773911 | |
CoYVCUV | CU-Co706-1-13 | SacI | 2576 | MF773916 |
DesLDV, Desmodium leaf distortion virus; CoYVCUV, Corchorus yellow vein Cuba virus; ToYLDD2, tomato yellow leaf distortion deltasatellite 2, DesLDD; Desmodium leaf distortion deltasatellite.