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. 2020 Apr 21;30(9):4899–4913. doi: 10.1093/cercor/bhaa082

Table 2.

Continued

Phenotype SNP ID Chr Position Allele 1* Allele 2 P-value β se Minor allele MAF INFO Genes within 500 kb locus window Locus No.
Cereb13 rs2699324 13 103 931 552 G A 5.4 × 10−16 -0.11 0.01 G 0.20 1.00 SLC10A2, MIR548AS 17
Cereb7 rs71446481 14 54 420 647 ACC A 8.2 × 10−11 0.07 0.01 ACC 0.45 0.98 MIR5580, BMP4 18
Cereb6b rs117332043 14 57 617 154 T C 2.7 × 10−23 0.21 0.02 T 0.07 0.99 OTX2-AS1, EXOC5, AP5M1, NAA30 19
Cereb13b rs76025319 14 57 606 103 C T 7.2 × 10−26 -0.21 0.02 C 0.07 1.00 OTX2-AS1, EXOC5, AP5M1, NAA30 19
DMN12c rs74826997 14 59 628 609 C T 1.3 × 10−11 0.11 0.02 C 0.12 1.00 DAAM1 20
Sens16c rs4901904 14 59 624 317 T C 9.4 × 10−12 -0.11 0.02 T 0.12 0.99 DAAM1 20
Sens18c 14:59631075 14 59 631 075 G GTTGT 3.1 × 10−14 -0.12 0.02 G 0.12 0.99 DAAM1 20
Cereb13 rs535481763 14 69 278 573 CT C 1.1 × 10−15 0.09 0.01 CT 0.46 0.94 RAD51B, ZFP36L1, ACTN1, ACTN1-AS1, DCAF5 21
Cereb25 rs3742960 15 58 248 088 T C 2.2 × 10−17 -0.09 0.01 C 0.45 1.00 MYZAP, GCOM1, POLR2M, ALDH1A2, AQP9 22
Cereb13 15:67888314 15 67 888 314 C CT 1.0 × 10−10 -0.12 0.02 CT 0.09 0.93 IQCH, IQCH-AS1, C15orf61, MAP2K5, SKOR1 23
DMN8 16:51440331 16 51 440 331 C CA 1.5 × 10−11 0.07 0.01 CA 0.44 0.99 None 24
DMN8d rs4843553 16 87 233 185 C A 1.6 × 10−11 0.07 0.01 A 0.42 1.00 LOC101928708, C16orf95, FBXO31, MAP1LC3B, ZCCHC14 25
DMN10d rs4843552 16 87 233 516 A G 2.2 × 10−20 0.10 0.01 G 0.42 1.00 LOC101928708, C16orf95, FBXO31, MAP1LC3B, ZCCHC14 25
DMN17d rs12920553 16 87 227 046 T G 2.2 × 10−15 -0.07 0.01 G 0.42 1.00 LOC101928708, C16orf95, FBXO31, MAP1LC3B, ZCCHC14 25
Cereb22 rs78011262 17 43 837 917 C T 5.6 × 10−11 -0.07 0.01 C 0.30 0.97 LRRC37A4P, ARL17A, LRRC37A3, LRRC37, LRRc37A, MAPK8IP1P2, CRHR1, LINC02210, MAPT-AS1, SPPL2C, MAPT, MAPT-IT1, STH 26
Cereb6 rs4891262 18 73 017 380 T C 7.4 × 10−16 0.09 0.01 T 0.35 1.00 ZNF407, ZADH2, TSHZ1, SMIM21 27

Notes: Phenotypes with the same superscript letter had locus windows that overlapped significantly. SNPs without rs IDs are notated by the chromosome and base pair location. Chr, chromosome; CC, cognitive control; DMN, default mode; Sens, sensory; Cereb, cerebellum; GMV, gray matter volume.

*Reference allele.