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. 2020 Jul 29;10:12736. doi: 10.1038/s41598-020-69623-6

Table 1.

Major topological properties of the empirical phylogenetic Molecular Ecological Networks (pMENs) of fungal communities for soil with (T1 and T2) and without (CK1 and CK2) wheat straw addition and their associated random pMENs.

Empirical networks Random networksd
Soil traits NO. of original OTUsa Similarity threshold (St) Network size (n)b R2 of Power law Avg connect (avg K) Avg path length (GD)c Avg clustering coefficient (avg CC) Modularity (no. of modules) Avg path distance (GD) Avg cluster coefficient (avg CC) Modularity (M)
Flowering stage CK1 300 0.89 166 0.719 8.928 2.920 0.155 0.279 (18) 2.700 ± 0.034 0.179 ± 0.011 0.236 ± 0.006
T1 300 0.86 180 0.645 11.511 2.999 0.278 0.300 (12) 2.536 ± 0.030 0.235 ± 0.014 0.198 ± 0.005
Fruiting stage CK2 300 0.87 181 0.714 8.166 3.186 0.264 0.409 (15) 2.778 ± 0.029 0.137 ± 0.013 0.266 ± 0.005
T2 300 0.88 202 0.636 12.545 2.727 0.214 0.261 (14) 2.496 ± 0.026 0.253 ± 0.010 0.186 ± 0.004

aThe number of OTUs that were originally used for network construction using the random matrix theory (RMT)-based approach.

bThe number of OTUs (i.e., nodes) in the network.

cGD geodesic distance.

dThe random networks were generated by rewiring all of the links of a pMEN with the identical numbers of nodes and links to the corresponding empirical pMEN.