Table 4.
DC-SIGN-Like sequences identified in selected fish species.
| Species | Chro. | Location | RefSeq Protein | Int. Motif | TM | Hept. Motif | CTLD |
|---|---|---|---|---|---|---|---|
| Oncorhynchus mykiss | Chr10 | 68,316,695..68,351,882 | XP_021475407.1 | +++ | 58..80 | 94..145 | 156..278 |
| 68,437,277..68,440,058 | XP_021475400.1 | ++ | 60..82 | 106..157 | 167..289 | ||
| 68,449,595..68,452,375 | XP_021472964.1 | ++ | 7..29 | 44..124 | 136..262 | ||
| 68,502,845..68,505,833 | XP_021475402.1 | ++ | 60..82 | 106..157 | 167..289 | ||
| Chr19 | 3,359,438..3,415,338 | XP_021428956.1 | + | 63..85 | 107..160 | 175..295 | |
| 3,418,729..3,424,484 | XP_021428954.1 | + | 62..84 | 107..179 | 193..313 | ||
| 3,426,261..3,427,566 | XP_021428962.1 | – | – | – | 24..144 | ||
| 3,615,353..3,621,025 | XP_021428969.1 | ++ | 62..84 | 107..179 | 193..313 | ||
| Salmo trutta | Chr11 | 16,730,161..16,733,194 | XP_029622272.1 | + | 59..81 | 77..158 | 166..292 |
| 16,911,497..16,937,038 | XP_029621727.1 | – | – | – | 161..284 | ||
| 18,643,399..18,648,784 | XP_029622357.1 | ++ | 65..87 | 106..156 | 179..300 | ||
| 18,740,308..18,756,197 | XP_029622352.1 | ++ | 86..108 | 134..185 | 195..319 | ||
| 18,775,740..18,784,853 | XP_029622368.1 | + | 39..61 | 83..133 | 146..270 | ||
| 18,918,066..18,936,039 | XP_029622359.1 | + | 58..80 | 92..168 | 177..297 | ||
| 21,422,649..21,430,498 | XP_029622481.1 | – | – | 3..167 | 191..315 | ||
| 21,527,965..21,532,327 | XP_029622476.1 | + | 32..54 | 97..309 | 317..437 | ||
| Danio rerio | Chr01 | 55,903,808..55,906,907 | XP_003197805.3 | ++ | 43..65 | 103..184 | 196..308 |
| 55,908,572..55,919,463 | XP_017211404.1 | ++ | 42..64 | 102..183 | 195..306 | ||
| 55,920,864..55,922,977 | XP_009293464.2 | ++ | 43..65 | 103..184 | 196..307 |