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. 2020 Jul 20;14(7):e0007960. doi: 10.1371/journal.pntd.0007960

Table 3. Upregulated proteins and their KEGG pathway interpretation from brain-derived endosomes.

Fold change is calculated as (KO-WT)/WT.

Gene ID Protein name Fold Change KEGG PATHWAY
HMGCL 3-hydroxy-3-methylglutaryl-Coenzyme A lyase(Hmgcl) 2 Synthesis and degradation of ketone bodies,
Valine, leucine and isoleucine degradation,
Butanoate metabolism, Metabolic pathways, Peroxisome
L1CAM L1 cell adhesion molecule(L1cam) 2.5 Axon guidance, Cell adhesion molecules (CAMs)
SHLB2 SH3-domain GRB2-like endophilin B2(Sh3glb2) 2.33 Endocytosis
AP2B1 adaptor-related protein complex 2, beta 1 subunit(Ap2b1) 3.5 Endocytosis, Synaptic vesicle cycle,
Endocrine and other factor-regulated calcium reabsorption,
Huntington’s disease
SYAC alanyl-tRNA synthetase(Aars) 2.17 Aminoacyl-tRNA biosynthesis
PYGB brain glycogen phosphorylase(Pygb) 4.5 Starch and sucrose metabolism, Metabolic pathways,
Insulin signaling pathway, Glucagon signaling pathway,Insulin resistance
KCC4 calcium/calmodulin-dependent protein kinase IV(Camk4) 2 Calcium signaling pathway, cAMP signaling pathway,
Osteoclast differentiation, Long-term potentiation
GPX1 glutathione peroxidase 1(Gpx1) 3 Glutathione metabolism, Arachidonic acid metabolism,
Thyroid hormone synthesis
PGP phosphoglycolate phosphatase(Pgp) 3 Glyoxylate and dicarboxylate metabolism,
Metabolic pathways, Biosynthesis of antibiotics, Carbon metabolism
TLN1 talin 1(Tln1) 3.33 Rap1 signaling pathway, Focal adhesion,
Platelet activation, HTLV-I infection