Skip to main content
. 2020 Aug 5;30(3):030504. doi: 10.11613/BM.2020.030504

Table 1. Comparison of modern techniques used for detection of cancer mutations.

Sanger sequencing NGS qPCR FISH CISH
Tumour biopsy gDNA gDNA gDNA gDNA in fixated cells gDNA in fixated cells
Liquid biopsy cfDNA cfDNA cfDNA / /
Sequence information partial sequence sequence partial sequence point mutation point mutation
Time of analysis 7 days 3 days 4h 4h 4h
Precision nucleotide resolution nucleotide resolution mutation resolution mutation resolution mutation resolution
Possibility of simultaneous sample analysis - + + - -
Possibility of simultaneous gene analysis + + - + (a few) -
Costs of a few sample analysis high high low medium low
Costs of high throughput analysis high low low medium medium
+ – possible. - – not possible. NGS – next generation sequencing. qPCR – quantitative polymerase chain reaction. FISH – fluorescence in situ hybridization. CISH – chromogenic in situ hybridization. gDNA – genomic DNA. cfDNA – circulating cell-free DNA.