TABLE 1.
Primers used in this study
| Primer | Nucleotide sequence (5′→3′) |
|---|---|
| Cloning | |
| 1-4004-F | GCGCAGCGGCGGCCGCGCTGATACCGCCGCCTTGACATTGATTATTGACTAGTT |
| 1-4004-R | TCAGGAGCTACATTAGGACCATCATCCTCAAGCTCAGAG |
| 4005-7993-F | TGAGGATGATGGTCCTAATGTAGCTCCTGAAACAAATGT |
| 4005-7993-R | ACACACTAACAAAAGCACTATGTAAGCTTGCACCAAAAT |
| 7994-12384-F | CAAGCTTACATAGTGCTTTTGTTAGTGTGTTGTCGAATA |
| 7994-12384-R | GGTTACCTCCTTAACGTGTACCACCTTGCCATCATTGTC |
| 12385-16986-F | GGCAAGGTGGTACACGTTAAGGAGGTAACCGCACAGAAT |
| 12385-16986-R | ACTCAACACGAGCGCGCTGTGGTATGATGCGTGAACATT |
| 16987-21901-F | GCATCATACCACAGCGCGCTCGTGTTGAGTGTTATGATG |
| 16987-21901-R | ATAAGAAATACCATCCTCACCAGCACTAGTAACATTAAG |
| 21902-26980-F | ACTAGTGCTGGTGAGGATGGTATTTCTTATCAACCCTGT |
| 21902-26980-R | ACTGACAGAAGCCATAAAGTTTCTGTTTAGACTAAATGA |
| 26981-28980-F | CTAAACAGAAACTTTATGGCTTCTGTCAGTTTTCAGGAT |
| 26981-28980-R | GCTCACTGACTTTAATTAACTGCGGCGAGGGGCGCGCCACCGCATCCCCAGCAT |
| Mutagenesis | |
| D350A-F | AAATGGTTTTGCTTTGCCAAGAATCCTACTAATTC |
| D350A-R | GAATTAGTAGGATTCTTGGCAAAGCAAAACCATTT |
| G332A-F | GCCATATATGATATTGCCAATCCTAAGGGCATTAG |
| G332A-R | CTAATGCCCTTAGGATTGGCAATATCATATATGGC |
| P334A-K335A-F | GATATTGGCAATGCTGCGGGCATTAGATGTGCC |
| P334A-K335A-R | GGCACATCTAATGCCCGCAGCATTGCCAGCATC |
| D330A-F | GAAAGCCATATATGCTATTGGCAATCCTAAGGGC |
| D330A-R | GCCCTTAGGATTGCCAATAGCATATATGGCTTTC |
| RT-qPCR | |
| IFN-λ1F | GGTGCTGGCGACTGTGATG |
| IFN-λ1R | GATTGGAACTGGCCCATGTG |
| IFN-λ3F | ACTTGGCCCAGTTCAAGTCT |
| IFN-λ3R | CATCCTTGGCCCTCTTGA |
| IFN-λ4F | GCTATGGGACTGTGGGTCTT |
| IFN-λ4R | AGGGAGCGGTAGTGAGAGAG |
| IFN-αF | ACCTTTGCTTTACTGGTGGCC |
| IFN-αR | ATCTGTGCCAGGAGCATCAAG |
| IFN-βF | TAGGCGACACTGTTCGTGTTG |
| IFN-βR | CCAAGCAAGTTGTAGCTCATGG |
| GAPDH-F | CAATGACCCCTTCATTGACC |
| GAPDH-R | GACAAGCTTCCCGTTCTCAG |
| Subgenome-F | AATCCAGGGCCACTTCGAA |
| Subgenome-R | TTCGCCCTTGGGAATTCTC |
| Genome-F | TGAAGCCGTCTCATACTATTCTG |
| Genome-R | AATCCCTCAACAGTGTCAGC |