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. 2020 Aug 1;7:114. doi: 10.1038/s41438-020-0336-y

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 3 — a CG, CHG, and CHH methylation in six DAMs, ITGR, and peach genome. Methylation rate (%) was indicated on the left y-axis and sRNA abundance (orange) expressed by Log₂ RPKM on the right y-axis. The treatment time point T1, T2, T3 and D7, and DAM genes are indicated at the bottom. b Cluster of methylated regions (Mrs). A total of 44 Methylated regions (Mrs) are marked in the bottom, while the corresponding Sr regions highlighted in yellow and denoted on top. Number of methylated regions starts from DAM1 to DAM6 for the sake of consistence with DAM position. Green—CG methylation. Purple—CHG methylation. Red—CHH methylation. The Mrs independent of siRNAs are named as downstream or upstream of adjacent Mrs (e.g. Mr2u, Mr17u, Mr18u, Mr18d, etc.)