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. 2020 Jul 13;117(30):17903–17912. doi: 10.1073/pnas.2000247117

Table 3.

gSPIM simulation results for the detection model and abundance

Scenario λ0 σ N ncap N Cov n Cov N Wid n Wid N MSE
True 0.570 1.320 166.0 115.8
SPIM3A 0.562 1.321 165.2 115.6 0.933 0.983 36.9 2.3 105.0
SPIM2A 0.566 1.321 164.0 115.0 0.958 0.950 37.6 4.8 119.1
SPIM1A 0.574 1.329 159.8 112.8 0.908 0.908 41.5 10.8 171.2
True 0.297 1.320 166.0 88.4
SPIM3B 0.296 1.311 163.8 88.3 0.950 0.992 64.0 0.01 279.7
SPIM2B 0.296 1.310 163.9 88.3 0.958 0.975 64.3 0.07 277.6
SPIM1B 0.297 1.313 162.5 88.2 0.967 0.950 64.0 1.62 281.1
SCR 0.295 1.311 163.9 0.983 64.1 282.7

Scenarios indicate the model used (SPIM or SCR), the number of replicated assignments (1 to 3), and whether the low-quality samples were included (A) or not (B). The low-quality samples were not included in the SCR analysis by default. λ0 is the baseline detection rate, σ is the detection function spatial-scale parameter, N is abundance, and ncap is the number of individuals captured (fewer when excluding the low-quality samples). The values listed here are the mean point estimates across 120 simulated datasets. “Cov” indicates the coverage of the 95% credible intervals, “Wid” indicates the mean width of the 95% credible intervals, and “MSE” indicates the mean-squared error of the point estimates.