Table 3.
Characteristics of genome sequences of Bradyrhizobium symbiodeficiens sp. nov., strains 85S1MBT (accession no. CP029427) and 65S1MB (accession no. CP041090), and close relatives Bradyrhizobium amphicarpaeae 39S1MBT (accession no. CP029426), Bradyrhizobium ottawaense OO99T (accession no. CP029425) and Bradyrhizobium shewense ERR11T (accession no. FMAI01000000)
Unless otherwise stated, data are from the ncbi assembly databases. na, Data not available.
|
Characteristic |
Strain |
||||
|---|---|---|---|---|---|
|
85S1MBT |
65S1MB |
39S1MBT |
OO99T |
ERR11T |
|
|
Genome assembly quality |
Complete |
Complete |
Complete |
Complete |
Draft |
|
Genome size (bp) |
7039503 |
7133277 |
7044517 |
8606328 |
9163226 |
|
Genes (total) |
6682 |
6795 |
6635 |
8238 |
8634* |
|
CDS (total) |
6625 |
6737 |
6579 |
8180 |
9479† |
|
CDS (coding) |
6414 |
6507 |
6441 |
7700 |
8548* |
|
Genes (RNA) |
57 |
58 |
56 |
58 |
86* |
|
rRNAs |
3 |
3 |
3 |
3 |
3† |
|
tRNAs |
50 |
51 |
49 |
51 |
57† |
|
Pseudo genes (total) |
211 |
230 |
138 |
480 |
na |
|
Repeat regions† |
30 |
34 |
48 |
177 |
231 |
|
DNA G+C content† |
64.27 |
64.34 |
64.66 |
63.83 |
63.22 |
|
Plasmids |
No |
No |
No |
No |
na |
|
Photosynthetic gene cluster |
No |
No |
Yes |
No |
No |
|
Symbiosis island |
No |
No |
No |
Yes |
Yes |