Table A1.
Number of DEG used as input to EnGNet for network reconstruction and their latter distribution in inferred networks. Genes that were not assigned to a cluster (or were comprised in minoritary clusters) were not taken into consideration for enrichment analyses.
| Liver wt | Liver ko | Spleen wt | Spleen ko | |
|---|---|---|---|---|
| Input genes | 1133 | 1153 | 506 | 426 |
| Network genes | 1118 | 1300 | 485 | 403 |
| Cluster 1 | 262 | 284 | 180 | 109 |
| Cluster 2 | 218 | 379 | 255 | 190 |
| Cluster 3 | 579 | 624 | 36 | 77 |
| Cluster 4 | 59 | 25 | ||
| Unconnected/minor clustered | 0 | 13 | 14 | 2 |