Table 4.
Comparison of genetic diversity statistics assessed for SSR and SNP sets recommended for routine fingerprinting.
| Marker Type | N loci | N | MD | A | Na | Ho | He | PIC | cum P(ID)unrelated | cum P(ID)sib |
|---|---|---|---|---|---|---|---|---|---|---|
| SSR | 9 * | 127 | 0 | 92 | 10.22 | 0.84 | 0.79 | 0.76 | 4.07 × 10−11 | 1.44 × 10−04 |
| SNP | 45 | 124 | 0.02% | 90 | 2 | 0.416 | 0.39 | 0.31 | 4.57 × 10−16 | 1.00 × 10−08 |
* set of nine recommended SSR loci [7]. N = number of observed accessions, MD = missing data, A = total number of amplified alleles, Na = average number of alleles per locus, Ho = observed heterozygosity, He = expected heterozygosity, PIC = polymorphic information content, P(ID) probability of identity = unrelated and sib.