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. 2020 Jul 27;76(Pt 8):713–723. doi: 10.1107/S2059798320009080

Table 6. Test-set COD for the side-chain neural network after it has been trained with individual features removed.

Values are the mean COD after training with 100 different random-number seeds with one standard error in parentheses.

Missing side-chain feature Test-set COD Decrease
No missing feature 0.6073 (2) 0.0000
Minimum difference density Z-score 0.6038 (2) 0.0035
Maximum atom overlap 0.6027 (2) 0.0046
Maximum B-factor change Z-score 0.6021 (2) 0.0052
Minimum best density Z-score 0.6000 (2) 0.0073
Mean best density Z-score 0.5968 (2) 0.0105
Maximum B-factor Z-score 0.5901 (2) 0.0172
Resolution 0.5874 (2) 0.0199
Rotamer score 0.5835 (2) 0.0238
Map-to-model correlation 0.5566 (2) 0.0507