Table 2. Calculated Michaelis-Menten parameters for chlorzoxazone 6-hydroxylation by wild-type and variant forms of CYP2E1.
Each value is the mean ± SD of three independent experiments. Vmax represents the maximal rate at which the enzyme metabolizes the substrate; Km represents the Michaelis constant; and the Clint value represents the intrinsic clearance. Three online software programs were simultaneously used to predict genetic mutations. The three algorithms predicted no effect (benign/tolerant/neutral) or loss of function (damaging/probably damaging/deleterious). When the results of two of the three software predictions were consistent with the results of the HPLC experiment, the results were considered to be consistent, and we added YES; otherwise, we added NO.
|
Variant |
Vmax± SD (pmol/min/pmol CYP2E1) |
Km± SD (µM) |
CLint (µL/min/pmol CYP2E1) (% of wild-type) |
Polyphen | SIFT | PROVEAN |
Concordance Y/N |
|---|---|---|---|---|---|---|---|
| Wild-type | 21.75 ± 1.413 | 63.47 ± 13.81 | 0.3841 ± 0.0631 | ||||
| c.1263C>T | 21.65 ± 1.393 | 56.95 ± 12.67 | 0.4027 ± 0.052 (102%) | N/A | Tolerated | Neutral | YES |
| c.1009C>T | 0.02 | N/A | N/A | Deleterious | N/A | ||
| c.[517G>A+1263C>T] | 21.34 ± 1.29 | 60.81 ± 12.46 | 0.379 ± 0.078 (98.6%) | N/A | N/A | N/A | N/A |
| c.517G>A | 23.06 ± 1.354 | 53.2 ± 11.03* | 0.511 ± 0.089 (131%)** | probably damaging | Tolerated | Deleterious | YES |
| c.[227G>A+1263C>T] | 14.54 ± 0.8015** | 64.09 ± 11.82 | 0.258 ± 0.055 (67.2%)** | N/A | N/A | N/A | N/A |
| c.227G>A | 12.96 ± 0.74** | 65.8 ± 12.45 | 0.22 ± 0.041 (57.2%)** | probably damaging | Damaging | Neutral | YES |
Notes.
P ≤ 0.05.
P ≤ 0.01.
P ≤ 0.001.