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. 2020 Jul 31;8:e9628. doi: 10.7717/peerj.9628

Table 2. Calculated Michaelis-Menten parameters for chlorzoxazone 6-hydroxylation by wild-type and variant forms of CYP2E1.

Each value is the mean ± SD of three independent experiments. Vmax represents the maximal rate at which the enzyme metabolizes the substrate; Km represents the Michaelis constant; and the Clint value represents the intrinsic clearance. Three online software programs were simultaneously used to predict genetic mutations. The three algorithms predicted no effect (benign/tolerant/neutral) or loss of function (damaging/probably damaging/deleterious). When the results of two of the three software predictions were consistent with the results of the HPLC experiment, the results were considered to be consistent, and we added YES; otherwise, we added NO.


Variant
Vmax± SD
(pmol/min/pmol CYP2E1)
Km± SD
(µM)
CLint
(µL/min/pmol CYP2E1)
(% of wild-type)
Polyphen SIFT PROVEAN Concordance
Y/N
Wild-type 21.75 ± 1.413 63.47 ± 13.81 0.3841 ± 0.0631
c.1263C>T 21.65 ± 1.393 56.95 ± 12.67 0.4027 ± 0.052 (102%) N/A Tolerated Neutral YES
c.1009C>T 0.02 N/A N/A Deleterious N/A
c.[517G>A+1263C>T] 21.34 ± 1.29 60.81 ± 12.46 0.379 ± 0.078 (98.6%) N/A N/A N/A N/A
c.517G>A 23.06 ± 1.354 53.2 ± 11.03* 0.511 ± 0.089 (131%)** probably damaging Tolerated Deleterious YES
c.[227G>A+1263C>T] 14.54 ± 0.8015** 64.09 ± 11.82 0.258 ± 0.055 (67.2%)** N/A N/A N/A N/A
c.227G>A 12.96 ± 0.74** 65.8 ± 12.45 0.22 ± 0.041 (57.2%)** probably damaging Damaging Neutral YES

Notes.

*

P ≤ 0.05.

**

P ≤ 0.01.

***

P ≤ 0.001.