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. Author manuscript; available in PMC: 2020 Aug 3.
Published in final edited form as: J Mol Biol. 2011 Jan 7;406(4):620–630. doi: 10.1016/j.jmb.2010.12.044

Table 2.

Indication of E2Ubc9’s important atomic positional fluctuation values (in angstrom)a

Isolated E2Ubc9 E2Ubc9–E3RanBP2–SUMO–TargetRanGAP1 E2Ubc9–SUMO–TargetRanGAP1
For the whole simulation time
E2Ubc9’s loop 2 3.7±1.9 19.9±13.6 8.6±4.9
The whole protein except loop 2 0.7±0.7 0.6±0.6 0.6±0.6
E2Ubc9’s catalytic Cys 1.8 0.3 0.2
E2Ubc9’s built-in E3 1.1±0.2 0.8±0.3 0.6±0.3
For specific time periods of E2Ubc9–E3RanBP2–SUMO–TargetRanGAP1
2–15 ns 19–24 ns 25–30 nsb

E2Ubc9’s loop 2 4.5±2.8 4.5±2.8 4.1±2.3
E3RanBP2’s flexible linker (Asp2665–Asp2673) 6.3±4.1 5.0±4.2 3.1±1.5
For specific time periods of E2Ubc9–SUMO–TargetRanGAP1
5.5–7.5 nsb 17–25 ns

E2Ubc9’s loop 2 1.6±0.4 3.0±2.2
a

Each entry corresponds to mean±SD of the atomic positional fluctuation values. The maximum and minimum values of the data set are indicated in parentheses.

b

The time intervals are selected from the time windows where no strong correlation is observed at the E2Ubc9–TargetRanGAP1 interface.