Table 2.
Indication of E2Ubc9’s important atomic positional fluctuation values (in angstrom)a
| Isolated E2Ubc9 | E2Ubc9–E3RanBP2–SUMO–TargetRanGAP1 | E2Ubc9–SUMO–TargetRanGAP1 | |
|---|---|---|---|
| For the whole simulation time | |||
| E2Ubc9’s loop 2 | 3.7±1.9 | 19.9±13.6 | 8.6±4.9 |
| The whole protein except loop 2 | 0.7±0.7 | 0.6±0.6 | 0.6±0.6 |
| E2Ubc9’s catalytic Cys | 1.8 | 0.3 | 0.2 |
| E2Ubc9’s built-in E3 | 1.1±0.2 | 0.8±0.3 | 0.6±0.3 |
| For specific time periods of E2Ubc9–E3RanBP2–SUMO–TargetRanGAP1 | |||
| 2–15 ns | 19–24 ns | 25–30 nsb | |
| E2Ubc9’s loop 2 | 4.5±2.8 | 4.5±2.8 | 4.1±2.3 |
| E3RanBP2’s flexible linker (Asp2665–Asp2673) | 6.3±4.1 | 5.0±4.2 | 3.1±1.5 |
| For specific time periods of E2Ubc9–SUMO–TargetRanGAP1 | |||
| 5.5–7.5 nsb | 17–25 ns | ||
| E2Ubc9’s loop 2 | 1.6±0.4 | 3.0±2.2 | |
Each entry corresponds to mean±SD of the atomic positional fluctuation values. The maximum and minimum values of the data set are indicated in parentheses.
The time intervals are selected from the time windows where no strong correlation is observed at the E2Ubc9–TargetRanGAP1 interface.