Table 1. Statistics of transcriptome sequencing in resistant and susceptible genotypic combinations under infected and control conditions.
| Sample Name | RC | RI | SC | SI | Total |
|---|---|---|---|---|---|
| No. of raw reads (Total read counts) | 71,977,040 | 76,316,072 | 79,092,064 | 63,449,258 | 290,834,434 |
| No. of bases (Gb) | 7.20 | 7.63 | 7.91 | 6.34 | 29.08 |
| GC (%) | 42.48 | 47.96 | 46.09 | 47.84 | 46.09 |
| ≥Q30 (%) | 93.33 | 91.41 | 92.42 | 91.73 | 92.22 |
| QC failed (%) | 4092082 (5.69) | 10275636 (13.46) | 13552346 (17.13) | 11388770 (17.95) | 39308834 (13.52) |
| High quality reads (%) | 67884958 (94.31) | 66040436 (86.54) | 65539718 (82.87) | 52060488 (82.05) | 251525600 (86.48) |
Where RC: Resistant control; RI: Resistant inoculated; SC: Susceptible control; SI: Susceptible inoculated.