Table 3.
Differences in Abundance of Bacterial Communities as Assessed by LEfSe
| Taxon Name | Post PBS | Post IRT | LDA Effect Size | q Value |
|---|---|---|---|---|
| Increased | ||||
| PAC001071_s | 1.40115 | 2.54230 | 3.75640 | 0.01452 |
| PAC001112_s | 1.14062 | 2.00330 | 3.63493 | 0.01453 |
| PAC001118_s | 0.00739 | 0.69573 | 3.53691 | 0.02864 |
| Lactobacillus helveticus group | 0.00000 | 0.21799 | 3.03857 | 0.01054 |
| PAC002441_s | 0.25844 | 0.38583 | 2.80774 | 0.01466 |
| PAC001244_s | 0.00341 | 0.12922 | 2.80012 | 0.01401 |
| Staphylococcus saprophyticus group | 0.00213 | 0.06748 | 2.51554 | 0.02861 |
| EU511112_s | 0.00487 | 0.05132 | 2.37711 | 0.02846 |
| PAC001550_s | 0.01650 | 0.05921 | 2.34357 | 0.01461 |
| PAC001370_s | 0.00000 | 0.00775 | 2.12212 | 0.01056 |
| Lactobacillus hamsteri | 0.00604 | 0.02909 | 2.10369 | 0.02840 |
| PAC001549_s | 0.01097 | 0.02841 | 2.01551 | 0.01459 |
| Decreased | ||||
| Lactobacillus intestinalis | 10.72607 | 4.84257 | 4.46862 | 0.02843 |
| PAC001128_s | 0.58433 | 0.33275 | 3.10076 | 0.02849 |
| PAC001121_s group | 0.25399 | 0.01503 | 3.07787 | 0.01400 |
| PAC001554_s | 0.22915 | 0.08702 | 2.85228 | 0.01462 |
| PAC001560_s | 0.14342 | 0.01524 | 2.80823 | 0.01464 |
| PAC002039_s | 0.13548 | 0.00990 | 2.79886 | 0.01404 |
| PAC002419_s | 0.12160 | 0.05311 | 2.53967 | 0.02855 |
| PAC001586_s | 0.05931 | 0.00502 | 2.43771 | 0.02562 |
| PAC001235_s | 0.08000 | 0.02974 | 2.41812 | 0.01456 |
| PAC002314_s | 0.04626 | 0.00175 | 2.35018 | 0.02568 |
| PAC001588_s | 0.05335 | 0.01130 | 2.33173 | 0.02565 |
| PAC001402_s | 0.05175 | 0.01300 | 2.29307 | 0.01458 |
| PAC001543_s | 0.03263 | 0.00800 | 2.12408 | 0.05199 |
| PAC001536_s | 0.02481 | 0.00000 | 2.10187 | 0.03048 |
| PAC001772_s | 0.02204 | 0.00468 | 2.07747 | 0.01403 |