Table 5. Core taxa* of each sampling group.
| Group | Taxa |
|---|---|
| Cloaca | Actinomyces |
| Enterococcus | |
| Lactobacillus | |
| Unclassified Actinomycetales | |
| Unclassified Gammaproteobacteria | |
| Colon | Bacteroides |
| Coprobacillus | |
| Lactobacillus | |
| Megamonas | |
| Unclassified Firmicutes | |
| Unclassified Bacteroidales | |
| Unclassified Burkholderiales | |
| Unclassified Clostridiales | |
| Unclassified RF39 | |
| Unclassified Coriobacteriaceae | |
| Unclassified Lachnospiraceae | |
| Unclassified Rikenellaceae | |
| Unclassified Ruminococcaceae | |
| Unclassified Veillonellaceae | |
| Magnum | Bacteroides |
| Brevundimonas | |
| Faecalibacterium | |
| Flavobacterium | |
| Lactobacillus | |
| Megamonas | |
| Methylobacterium | |
| Pseudomonas | |
| Rhodobacter | |
| Unclassified Betaproteobacteria | |
| Unclassified Actinomycetales | |
| Unclassified Bacteroidales | |
| Unclassified Burkholderiales | |
| Unclassified Clostridiales | |
| Unclassified Caulobacteraceae | |
| Unclassified Enterobacteriaceae | |
| Unclassified Lachnospiraceae | |
| Unclassified Microbacteriaceae | |
| Unclassified Moraxellaceae | |
| Unclassified Ruminococcaceae | |
| Unclassified Xanthomonadaceae |
* Genera detected in all samples in each group were considered as core genera.