| AID | activation-induced cytidine deaminase |
| AIP | autoimmune pancreatitis |
| AIT | allergen-induced immunotherapy |
| APC | antigen presenting cell |
| APRIL | a proliferation-inducing ligand |
| BAFF B | B lymphocyte-activating factor of tumor necrosis factor family |
| Bφ | basophil |
| Breg | regulatory B lymphocyte |
| C | complement component |
| CA | pancreatic carbonic anhydrase |
| CCL | C-C chemokine motif ligand |
| CD | cluster of differentiation |
| CP | chronic pancreatitis |
| CTGF | connective tissue growth factor |
| CXCL | C-X-C chemokine motif ligand |
| CXCR | C-X-C chemokine receptor |
| DAMP | damage associated molecular pattern |
| EC | endothelial cell |
| Eφ | eosinophil |
| FB | fibroblast |
| FcγR | Immunoglobulin G fragment C gamma receptor |
| FGFBP2 | fibroblast growth factor binding protein 2 |
| FliC | flagellin |
| GC | germinal center |
| GWAS | genome-wide association study |
| HLA | human leukocyte antigen |
| H. pylori | Helicobacter pylori |
| IgG4-RD | IgG4-related disease |
| IFN | interferon |
| IL | interleukin |
| IRF-7 | interferon regulatory factor-7 |
| K | lysine |
| LF | lactoferrin |
| LOXL2 | lysyl oxidase-like 2 |
| MAMP | microbe-associated molecular pattern |
| mCRP | monomeric C-reactive protein |
| MFB | myofibroblast |
| MMP | matrix metalloproteinase |
| MST | mammalian STE20-like protein kinase |
| Mφ | macrophage |
| NLR | nucleotide-binding oligomerization domain like receptor |
| P | proline |
| PAMP | pathogen-associated molecular pattern |
| PBMC | peripheral blood mononuclear cell |
| PBP | plasminogen-binding protein |
| pDC | plasmacytoid dendritic cell |
| PDGF | platelet-derived growth factor |
| PDGFB | platelet-derived growth factor B |
| PMN | polymorphonuclear neutrophil |
| Q | glutamine |
| R | arginine |
| RT-PCR | reverse transcriptase assisted polymerase chain reaction |
| S | serine |
| SIPS | systemic IgG4-related plasmacytic syndrome |
| SLAMF7 | signaling lymphocytic activation molecule F7 |
| SLE | systemic lupus erythematosus |
| SNP | single nucleotide polymorphism |
| SPINK1 | serine peptidase inhibitor, Kazal type 1 |
| PST1 | pancreatic secretary trypsin inhibitor-1 |
| PRSS1 | protease serine 1 (trypsin 1) |
| ST2 | suppression of tumorigenicity 2 |
| Tc | cytotoxic T lymphocyte |
| TCN1 | transcobalamin 1 |
| TEM | T cells with effector memory phenotype |
| Tfh | follicular helper T cell |
| TGF | transforming growth factor |
| Th | helper T lymphocyte |
| TIMP | tissue inhibitor of matrix metalloproteinase |
| TLR | Toll-like receptor |
| Treg | regulatory T lymphocyte |
| UBR2 | ubiquitin–protein ligase E3 component n-region 2 |