Table 4.
Summary of the major and minor QTLs for various salinity tolerance component traits.
| Trait Name | QTL Name | Year | Treatment | LG | Position (cM) | Marker Interval | LOD Value |
PVE (%) | Additive Effect | Allele-Contributing Parent |
|---|---|---|---|---|---|---|---|---|---|---|
| Yield and Yield-Related Traits | ||||||||||
| SSI_YP | qSSIYP6.1 | 2016–17 | – | CaLG06 | 226.1 | AX-123640392–AX-123640389 | 5.7 | 28.4 | 0.1 | DCP92-3 |
| qSSIYP6.1 | 2015–16 | – | CaLG06 | 226.1 | AX-123640392–AX-123640389 | 4.8 | 12.2 | 0.1 | DCP92-3 | |
| qSSIYP3.1 | 2016–17 | – | CaLG03 | 50.79 | AX-123659975–AX-123622699 | 5.3 | 10.0 | 0 | DCP92-3 | |
| qSSIYP6.2 | 2016–17 | – | CaLG06 | 260.98 | AX-123635094–AX-123635091 | 3.8 | 8.3 | 0 | DCP92-3 | |
| SSI_100SW | qSSI100SW3.1 | 2016–17 | – | CaLG03 | 50.79 | AX-123659975–AX-123622699 | 4.6 | 10.1 | 0.1 | DCP92-3 |
| qSSI100SW2.1 | 2015–16 | – | CaLG02 | 62.91 | AX-123659415–AX-123620733 | 3.7 | 8.9 | 0.1 | DCP92-3 | |
| STI_YP | qSTIYP5.1 | 2016–17 | – | CaLG05 | 20.31 | AX-123653399–AX-123653409 | 4.8 | 8.6 | 0 | DCP92-3 |
| qSTIYP6.1 | 2016–17 | – | CaLG06 | 268.65 | AX-123640437–AX-123655585 | 4.3 | 8.1 | 0 | DCP92-3 | |
| STI_100SW | qSTI100SW3.1 | 2016–17 | – | CaLG03 | 50.79 | AX-123659975–AX-123622699 | 8.7 | 17.1 | −0.1 | ICCV10 |
| 100SW | q100SWS3.1 | 2016–17 | Saline | CaLG03 | 50.79 | AX-123659975–AX-123622699 | 6.9 | 13.9 | −0.8 | ICCV10 |
| q100SWS3.1 | 2015–16 | CaLG03 | 56.21 | AX-123641496–AX-123622502 | 3.1 | 8.8 | −0.7 | ICCV10 | ||
| q100SWS2.1 | 2015–16 | CaLG02 | 39.16 | AX-123620430–AX-123659350 | 3.4 | 7.7 | −0.6 | ICCV10 | ||
| q100SWC5.1 | 2015–16 | Control | CaLG05 | 58.7 | AX-123631523–AX-123631537 | 3.2 | 10.1 | −0.9 | ICCV10 | |
| q100SWC7.1 | 2015–16 | CaLG07 | 92.67 | AX-123636120–AX-123636108 | 3 | 7.8 | 0.8 | DCP92-3 | ||
| YPP | qYPPS6.1 | 2016–17 | Saline | CaLG06 | 270.65 | AX-123635072–AX-123640437 | 3.5 | 7.1 | 0.2 | DCP92-3 |
| qYPPC6.1 | 2015–16 | Control | CaLG06 | 236.66 | AX-123655575–AX-123663343 | 6.5 | 13.8 | −0.8 | ICCV10 | |
| qYPPC5.1 | 2015–16 | CaLG05 | 20.31 | AX-123653409–AX-123653399 | 4.7 | 10.2 | 7.8 | DCP92-3 | ||
| qYPPC5.1 | 2016–17 | CaLG05 | 20.31 | AX-123653399–AX-123653409 | 4.9 | 8.7 | 7.4 | DCP92-3 | ||
| qYPPC7.1 | 2015–16 | CaLG02 | 120.16 | AX-123620346–AX-123620222 | 3.2 | 6.5 | 6.7 | DCP92-3 | ||
| qYPPC4.1 | 2016–17 | CaLG04 | 87.63 | AX-123630936–AX-123652553 | 3.7 | 6.5 | 6.5 | DCP92-3 | ||
| PPP | qPPP8.1 | 2015–16 | Saline | CaLG08 | 36.06 | AX-123638292–AX-123664233 | 3.3 | 8.1 | 3.6 | DCP92-3 |
| Agronomic traits | ||||||||||
| PH | qPHC5.2 | 2016–17 | Saline | CaLG05 | 60.33 | AX-123653281–AX-123631517 | 4.1 | 10.0 | 3.6 | DCP92-3 |
| qPHC5.1 | 2016–17 | Control | CaLG05 | 16.55 | AX-123662454–AX-123631761 | 6.1 | 11.8 | 3.9 | DCP92-3 | |
| qPHC7.1 | 2015–16 | CaLG07 | 230.14 | AX-123635844–AX-123655878 | 3.8 | 9.2 | 8.9 | DCP92-3 | ||
| qPHC6.1 | 2015–16 | CaLG06 | 44.23 | AX-123654072–AX-123633446 | 3.4 | 8.1 | −4.9 | ICCV10 | ||
| NB | qNBC8.1 | 2015–16 | Control | CaLG08 | 44.91 | AX-123638389–AX-123638445 | 5.5 | 12.7 | −1.7 | ICCV10 |
| qNBC8.2 | 2015–16 | CaLG08 | 10.22 | AX-123657789–AX-123638459 | 4 | 8.9 | 1.4 | DCP92-3 | ||
| qNBC8.3 | 2016–17 | CaLG08 | 44.91 | AX-123638389–AX-123638445 | 3.5 | 6.1 | −1.4 | ICCV10 | ||
(SSI_YP: SSI for yield per plant; SSI_100SW: SSI for 100 seed weight; STI_YP: STI for yield per plant; STI_100SW: STI for 100 seed weight; 100SW: 100 seed weight; YPP: yield per plant; PPP: pods number per plant; PH: plant height; NB: number of branches per plant).