Table 3.
Single nucleotide polymorphisms (SNPs), Insertions and deletions (InDels), and total variants identified in resistant (R) and susceptible (S) bulks relative to the Brassica rapa reference genome v1.5.
| Chrom. | SNPs | InDels | Total | |||
|---|---|---|---|---|---|---|
| (×1000) | (×1000) | (×1000) | ||||
| R | S | R | S | R | S | |
| A01 | 57.5 | 56.1 | 6.1 | 6.0 | 63.6 | 62.0 |
| A02 | 53.8 | 52.1 | 5.6 | 5.4 | 59.4 | 57.5 |
| A03 | 87.1 | 86.5 | 9.1 | 9.0 | 96.2 | 95.5 |
| A04 | 37.9 | 36.2 | 3.9 | 3.8 | 41.8 | 40.0 |
| A05 | 58.0 | 57.0 | 6.2 | 6.1 | 64.2 | 63.1 |
| A06 | 60.4 | 60.5 | 7.0 | 6.8 | 67.4 | 67.4 |
| A07 | 58.2 | 56.4 | 6.0 | 5.9 | 64.2 | 62.3 |
| A08 | 48.0 | 42.8 | 5.2 | 4.9 | 53.2 | 47.7 |
| A09 | 80.4 | 79.4 | 14.4 | 14.2 | 94.8 | 93.5 |
| A10 | 44.4 | 44.0 | 4.8 | 4.7 | 49.2 | 48.7 |
| Total | 585.8 | 571.0 | 68.3 | 66.6 | 654.1 | 637.7 |