Table 1.
Early response upregulated genes detected in viral infections
| NCBI gene ID | Gene name | logFC | FDR | Gene description (Source) |
|---|---|---|---|---|
| 5563663 | CLIPB35 | 3.06 | 1.12E-12 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5564201 | CLIPB15 | 4.14 | 5.37E-11 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5564288 | CTLMA14 | 4.01 | 4.20E-09 | C-Type Lectin (CTL) - mannose binding (VB Community Annotation) |
| 5578692 | 2.58 | 3.67E-07 | Clip-domain serine protease (UniProtKB/TrEMBL; Acc: Q1HQI3) | |
| 5570115 | 7.1 | 5.13E-06 | Trypsin-eta, putative (VB Community Annotation) | |
| 5563616 | CLIPB34 | 5.52 | 5.21E-06 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5574170 | 5.4 | 1.02E-05 | Serine protease (VB Community Annotation) | |
| 5575350 | 6.45 | 3.50E-05 | Serine protease (VB Community Annotation) | |
| 5565977 | CLIPB46 | 3.61 | 4.70E-05 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5572333 | 6.15 | 6.90E-05 | Clip-domain serine protease, putative (VB Community Annotation) | |
| 5575395 | 3.03 | 7.53E-04 | Prohibitin, putative (VB Community Annotation) | |
| 5567561 | CLIPB42 | 3.23 | 2.09E-03 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5575054 | 4.59 | 2.09E-03 | Serine protease, putative (VB Community Annotation) | |
| 5575056 | CTLMA13 | 6.06 | 2.32E-03 | C-Type Lectin (CTL) - mannose binding (VB Community Annotation) |
| 5563566 | CLIPB1 | 2.94 | 2.37E-03 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5578083 | 2.71 | 4.11E-03 | F-spondin (VB Community Annotation) | |
| 5576674 | 3.55 | 5.22E-03 | ATP-binding cassette sub-family A member 3, putative (VB Community Annotation) | |
| 5569658 | CLIPD1 | 4.9 | 6.46E-03 | Clip-Domain Serine Protease family D (VB Community Annotation) |
| 5570931 | CLIPB22 | 4.09 | 7.35E-03 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5578380 | 2.24 | 7.47E-03 | Bm-40 precursor (VB Community Annotation) | |
| 5567077 | CLIPE8 | 4.87 | 7.91E-03 | Clip-Domain Serine Protease family E. Protease homologue (VB Community Annotation) |
| 5571998 | PGRPS1 | 3.94 | 1.07E-02 | Peptidoglycan Recognition Protein (short) (VB Community Annotation) |
| 5573598 | CLIPD6 | 3.27 | 1.44E-02 | Clip-Domain Serine Protease family D (VB Community Annotation) |
| 5579417 | Tf1 | 4.8 | 1.74E-02 | Transferrin (VB Community Annotation) |
| 5569420 | GNBPA1 | 6.63 | 1.87E-02 | Gram-Negative Binding Protein (GNBP) or Beta-1 3-Glucan Binding Protein (BGBP) (VB Community Annotation) |
| 5572428 | 4 | 3.56E-02 | Macroglobulin/complement (VB Community Annotation) | |
| 5564141 | 3.21 | 4.92E-02 | Niemann-Pick Type C-2, putative (VB Community Annotation) |
Abbreviations: FC, fold change; FDR, false discovery rate corrected P-value; VB, vector base (https://www.vectorbase.org/)