Table 2.
Late response upregulated genes detected in viral infections
| Gene ID | Gene name | logFC | FDR | Gene description |
|---|---|---|---|---|
| 110676293 | LYSC11 | 2.91 | 1.35E-10 | C-Type Lysozyme (Lys-A) (VB Community Annotation) |
| 5563663 | CLIPB35 | 2.89 | 2.50E-10 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5564288 | CTLMA14 | 4.07 | 9.29E-09 | C-Type Lectin (CTL) - mannose binding (VB Community Annotation) |
| 5565977 | CLIPB46 | 5.05 | 1.50E-08 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5564201 | CLIPB15 | 3.09 | 3.16E-06 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5574112 | 3.42 | 5.84E-05 | GTP cyclohydrolase i (VB Community Annotation) | |
| 5575350 | 6.38 | 6.41E-05 | Sserine protease (VB Community Annotation) | |
| 5574170 | 4.21 | 7.38E-05 | Serine protease (VB Community Annotation) | |
| 5566832 | SRPN3 | 7.02 | 1.66E-04 | Serine Protease Inhibitor (serpin) likely cleavage at T/I (VB Community Annotation) |
| 5578692 | 2.29 | 5.05E-04 | Clip-domain serine protease (UniProtKB/TrEMBL; Acc: Q1HQI3) | |
| 5572333 | 6.2 | 6.33E-04 | Clip-domain serine protease, putative (VB Community Annotation) | |
| 5563725 | 4.67 | 1.50E-03 | Serine protease inhibitor, serpin (VB Community Annotation) | |
| 5572968 | RpS2 | 2.35 | 2.74E-03 | 40S ribosomal protein S2 (UniProtKB/TrEMBL; Acc: Q1HRV1) |
| 5569658 | CLIPD1 | 4.81 | 6.39E-03 | Clip-Domain Serine Protease family D (VB Community Annotation) |
| 5574952 | 4.8 | 6.58E-03 | Metalloproteinase, putative (VB Community Annotation) | |
| 5576150 | 3.55 | 7.79E-03 | Lipase 1 precursor (VB Community Annotation) | |
| 5572428 | 5.11 | 7.79E-03 | Macroglobulin/complement (VB Community Annotation) | |
| 5563616 | CLIPB34 | 3.39 | 7.90E-03 | Clip-Domain Serine Protease family B (VB Community Annotation) |
| 5569420 | GNBPA1 | 6.98 | 8.71E-03 | Gram-Negative Binding Protein (GNBP) or Beta-1 3-Glucan Binding Protein (BGBP) (VB Community Annotation) |
| 5579417 | Tf1 | 6.46 | 1.12E-02 | Transferrin (VB Community Annotation) |
| 5571998 | PGRPS1 | 4.88 | 3.36E-02 | Peptidoglycan Recognition Protein (short) (VB Community Annotation) |
| 5575056 | CTLMA13 | 4.31 | 4.11E-02 | C-Type Lectin (CTL) - mannose binding (VB Community Annotation) |
Abbreviations: FC, fold change; FDR, false discovery rate corrected P-value; VB, vector base (https://www.vectorbase.org/)