Table 2.
Comparison | Motifs (number) | Cv error (%) | Cv error Std | Mc error (%) | Mc EP | RM error (%) | RM error Std |
---|---|---|---|---|---|---|---|
hcrtr | |||||||
Day and night | |||||||
•WT/Het | 173 | 25.5 | 6.77 | 27.7 | 1.88 | 39.0 | 1.93 |
•WT/Hom | 83 | 24.7 | 6.07 | 50.0 | 2.83 | 47.8 | 3.66 |
•Het/Hom | 235 | 24.7 | 3.76 | 27.7 | 1.88 | 38.6 | 1.83 |
Day | |||||||
•WT/Het | 80 | 19.5 | 9.60 | 27.7 | 2.66 | 37.9 | 1.08 |
•WT/Hom | 195 | 16.7 | 7.50 | 50.0 | 4.00 | 48.7 | 4.22 |
•Het/Hom | 55 | 22.7 | 7.02 | 27.7 | 2.66 | 33.8 | 2.01 |
Night | |||||||
•WT/Het | 79 | 16.3 | 6.38 | 27.7 | 2.66 | 37.1 | 7.17 |
•WT/Hom | 53 | 12.8 | 9.58 | 50.0 | 4.00 | 52.3 | 6.16 |
•Het/Hom | 76 | 16.0 | 7.27 | 27.7 | 2.66 | 36.0 | 5.05 |
Melatonin (day) | |||||||
•Control | 40 | 0 | 0 | 25.0 | 4.42 | 16.4 | 3.67 |
•0.01μM | 89 | 1.39 | 4.52 | 16.7 | 4.39 | 30.0 | 15.2 |
•0.1μM | 192 | 1.39 | 4.52 | 16.7 | 4.39 | 20.5 | 18.0 |
•1μM | 132 | 2.78 | 6.02 | 16.7 | 4.39 | 29.5 | 8.67 |
•3μM | 97 | 0 | 0 | 16.7 | 4.39 | 48.6 | 11.2 |
•10μM | 250 | 2.78 | 6.02 | 16.7 | 4.39 | 20.0 | 9.40 |
•30μM | 133 | 0 | 0 | 16.7 | 4.39 | 32.2 | 7.89 |
PTZ (day) | |||||||
•Control | 26 | 0 | 0 | 46.2 | 6.91 | 15.8 | 6.43 |
•2.5 mM | 55 | 0 | 0 | 35.7 | 9.06 | 42.1 | 11.4 |
•5 mM | 162 | 0 | 0 | 32.1 | 8.83 | 34.3 | 18.0 |
•7.5 mM | 104 | 0 | 0 | 32.1 | 8.83 | 49.9 | 14.7 |
A table showing the performance of each classifier. Each classifier sought to separate the data shown in the comparison column, e.g., hcrtr+/+ (WT) and hcrtr−/+ (Het). For the pharmacological comparisons, each condition was compared with the rest of the conditions grouped together, aside from the control data which was excluded. For each comparison, 250 motifs were chosen by mRMR, then a smaller number were retained (see motifs column) based on classification error curves (see Extended Data Fig. 4-1A). Cv, 10-fold cross validated; Std, SD across the 10 folds; Mc, majority class classifier; EP, SE of proportion; RM, classifiers built from random motif subsets; WT, hcrtr+/+; Het, hcrtr−/+; Hom, hcrtr−/−.