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. 2020 Jul 13;7(4):ENEURO.0408-19.2020. doi: 10.1523/ENEURO.0408-19.2020

Table 2.

hcrtr and pharmacological classifier performance Download Figure 4-1, TIF file.

Comparison Motifs (number) Cv error (%) Cv error Std Mc error (%) Mc EP RM error (%) RM error Std
hcrtr
Day and night
WT/Het 173 25.5 6.77 27.7 1.88 39.0 1.93
WT/Hom 83 24.7 6.07 50.0 2.83 47.8 3.66
Het/Hom 235 24.7 3.76 27.7 1.88 38.6 1.83
Day
WT/Het 80 19.5 9.60 27.7 2.66 37.9 1.08
WT/Hom 195 16.7 7.50 50.0 4.00 48.7 4.22
Het/Hom 55 22.7 7.02 27.7 2.66 33.8 2.01
Night
WT/Het 79 16.3 6.38 27.7 2.66 37.1 7.17
WT/Hom 53 12.8 9.58 50.0 4.00 52.3 6.16
Het/Hom 76 16.0 7.27 27.7 2.66 36.0 5.05
Melatonin (day)
Control 40 0 0 25.0 4.42 16.4 3.67
0.01μM 89 1.39 4.52 16.7 4.39 30.0 15.2
0.1μM 192 1.39 4.52 16.7 4.39 20.5 18.0
1μM 132 2.78 6.02 16.7 4.39 29.5 8.67
3μM 97 0 0 16.7 4.39 48.6 11.2
10μM 250 2.78 6.02 16.7 4.39 20.0 9.40
30μM 133 0 0 16.7 4.39 32.2 7.89
PTZ (day)
Control 26 0 0 46.2 6.91 15.8 6.43
2.5 mM 55 0 0 35.7 9.06 42.1 11.4
5 mM 162 0 0 32.1 8.83 34.3 18.0
7.5 mM 104 0 0 32.1 8.83 49.9 14.7

A table showing the performance of each classifier. Each classifier sought to separate the data shown in the comparison column, e.g., hcrtr+/+ (WT) and hcrtr−/+ (Het). For the pharmacological comparisons, each condition was compared with the rest of the conditions grouped together, aside from the control data which was excluded. For each comparison, 250 motifs were chosen by mRMR, then a smaller number were retained (see motifs column) based on classification error curves (see Extended Data Fig. 4-1A). Cv, 10-fold cross validated; Std, SD across the 10 folds; Mc, majority class classifier; EP, SE of proportion; RM, classifiers built from random motif subsets; WT, hcrtr+/+; Het, hcrtr−/+; Hom, hcrtr−/−.