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. 2020 Jul 30;8:873. doi: 10.3389/fbioe.2020.00873

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Copyright © 2020 Zeuner, Thomsen, Stringer, Krogh, Meyer and Holck.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Phylogenetic tree of pectin lyases included in the current study shown versus all reviewed Swiss-Prot entries (red labels indicating Swiss-Prot accession numbers). From the radial tree (top right), three clusters were identified: a bacterial cluster (BC, red) and three fungal clusters (FC1-FC3, green). Pectin lyases PelA, PelB, PelC, PelD, and PelF from A. niger strains CBS 513.88 and CBS 120.49 are indicated with colored dots. The UniProt database does not indicate CBS 120.49 in these entries, but tracking the submissions they all originate from A. niger CBS 120.49. AlPelA from the same A. luchuensis strain as AlPelB, AlPelC, AlPelD, and AlPelF is indicated to visualize its close relatedness to AtPelA studied here.