TABLE 1.
MiRNAs identified in MS2-tagged RNA affinity assay.
| miRNA | MS2-C | MS2-F8 | Fold change | Fold change Log2 |
| hsa-miR-92a-3p | 1863 | 7696 | 4.13 | 2.05 |
| hsa-miR-19b-3p | 516 | 6122 | 11.86 | 3.57 |
| hsa-miR-17-5p | 217 | 4907 | 22.61 | 4.5 |
| hsa-miR-25-3p | 800 | 4244 | 5.31 | 2.41 |
| hsa-miR-191-5p | 286 | 3012 | 10.53 | 3.4 |
| hsa-miR-19a-3p | 282 | 2736 | 9.7 | 3.28 |
| hsa-miR-93-5p | 189 | 1845 | 9.76 | 3.29 |
| hsa-miR-222-3p | 154 | 845 | 5.49 | 2.46 |
| hsa-miR-7-5p | 63 | 673 | 10.68 | 3.42 |
| hsa-miR-24-3p | 74 | 662 | 8.95 | 3.16 |
| hsa-miR-106a-5p | 27 | 588 | 21.78 | 4.44 |
| hsa-miR-221-3p | 70 | 524 | 7.49 | 2.9 |
| hsa-miR-125a-5p | 97 | 522 | 5.38 | 2.43 |
| hsa-miR-196a-5p | 92 | 375 | 4.08 | 2.03 |
| hsa-miR-186-5p | 35 | 355 | 10.14 | 3.34 |
| hsa-miR-196b-5p | 46 | 328 | 7.13 | 2.83 |
| hsa-miR-130b-3p | 20 | 293 | 14.65 | 3.87 |
| hsa-miR-3607-3p | 1 | 278 | 278 | 8.12 |
| hsa-miR-16-5p | 10 | 255 | 25.5 | 4.67 |
| hsa-let-7f-5p | 55 | 250 | 4.55 | 2.18 |
| hsa-miR-378a-3p | 10 | 235 | 23.5 | 4.55 |
| hsa-let-7g-5p | 16 | 214 | 13.38 | 3.74 |
| hsa-miR-454-3p | 30 | 207 | 6.9 | 2.79 |
| hsa-miR-425-5p | 48 | 203 | 4.23 | 2.08 |
| hsa-miR-301a-3p | 15 | 182 | 12.13 | 3.6 |
| hsa-miR-103a-3p | 12 | 181 | 15.08 | 3.91 |
| hsa-miR-505-3p | 39 | 172 | 4.41 | 2.14 |
| hsa-miR-18a-5p | 2 | 167 | 83.5 | 6.38 |
| hsa-miR-20a-5p | 11 | 163 | 14.82 | 3.89 |
| hsa-miR-5701 | 1 | 154 | 154 | 7.27 |
| hsa-miR-7641 | 30 | 139 | 4.63 | 2.21 |
| hsa-miR-424-5p | 21 | 122 | 5.81 | 2.54 |
| hsa-miR-1275 | 12 | 117 | 9.75 | 3.29 |
| hsa-miR-1307-3p | 19 | 97 | 5.11 | 2.35 |
| hsa-miR-151a-5p | 14 | 89 | 6.36 | 2.67 |
| hsa-miR-185-5p | 7 | 87 | 12.43 | 3.64 |
| hsa-miR-378a-5p | 19 | 85 | 4.47 | 2.16 |
| hsa-miR-30c-5p | 19 | 83 | 4.37 | 2.13 |
| hsa-miR-455-3p | 10 | 82 | 8.2 | 3.04 |
| hsa-miR-31-5p | 6 | 81 | 13.5 | 3.75 |
| hsa-miR-324-5p | 4 | 81 | 20.25 | 4.34 |
| hsa-miR-106b-3p | 11 | 78 | 7.09 | 2.83 |
| hsa-miR-29a-3p | 5 | 72 | 14.4 | 3.85 |
| hsa-miR-664b-3p | 1 | 69 | 69 | 6.11 |
| hsa-miR-3651 | 2 | 68 | 34 | 5.09 |
| hsa-miR-10a-5p | 14 | 63 | 4.5 | 2.17 |
| hsa-miR-532-5p | 14 | 62 | 4.43 | 2.15 |
| hsa-miR-34a-5p | 7 | 57 | 8.14 | 3.03 |
| hsa-miR-93-3p | 10 | 49 | 4.9 | 2.29 |
| hsa-miR-1246 | 10 | 48 | 4.8 | 2.26 |
| hsa-miR-149-5p | 7 | 47 | 6.71 | 2.75 |
| hsa-miR-29c-3p | 1 | 46 | 46 | 5.52 |
| hsa-miR-1269b | 8 | 45 | 5.63 | 2.49 |
| hsa-miR-148b-3p | 2 | 41 | 20.5 | 4.36 |
| hsa-miR-15b-5p | 2 | 41 | 20.5 | 4.36 |
| hsa-miR-361-5p | 4 | 38 | 9.5 | 3.25 |
| hsa-miR-128-3p | 6 | 37 | 6.17 | 2.62 |
| hsa-miR-3653-3p | 1 | 36 | 36 | 5.17 |
| hsa-miR-320a | 6 | 34 | 5.67 | 2.5 |
| hsa-miR-194-5p | 6 | 33 | 5.5 | 2.46 |
| hsa-miR-324-3p | 3 | 33 | 11 | 3.46 |
| hsa-miR-421 | 7 | 32 | 4.57 | 2.19 |
| hsa-miR-30b-5p | 1 | 31 | 31 | 4.95 |
| hsa-miR-146b-5p | 5 | 30 | 6 | 2.58 |
| hsa-miR-374b-5p | 37 | 72 | 1.95 | 0.96 |
| hsa-miR-144-5p | 0 | 0 |
The list of 64 miRNAs detected in MS2-F8 3′UTR (MS-F8) sample with the highest fold change compared to control (MS2-E) with log2(fold change) >2 and read counts ≥30 (except miR-374b and miR-144). Bold miRNAs were predicted by prediction algorithms. The predicted miRNAs and their association scores are summarized in Supplementary Table S1. The underlined miRNAs were selected for further evaluation. Co-data for control miRNA:miR-144-5p and miR-374b-3p included for comparison.