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. 2020 Jul 17;8(7):1071. doi: 10.3390/microorganisms8071071

Table 1.

Polymerase chain reaction cycling condition and primer sequences.

Gene Primer Sequences PCR Cycling Conditions Reference
gyrB F- GCC CTG GTA TGT ATA TTG GAT CTA C
R- GGT CAT AAT AAC TTC TAC AGC AGG A
Initial denaturation of 2 min at 94 °C, followed by 30 cycles at 94 °C for 30 s at, 52 °C for 1 min and 72 °C for 30 s, and final elongation at 72 °C for 10 min. [12]
nheABC F- AAG CIG CTC TTC GIA TTC
R- ITI GTT GAA ATA AGC TGT GG
Initial denaturation of 5 min at 94 °C, followed by 30 cycles at 94 °C for 30 s, 49 °C for 1 min and at 72 °C for 1 min, and final elongation at 72 °C for 5 min [13]
hblABD F-GTA AAT TAI GAT GAI CAA TTT C
R- AGA ATA GGC ATT CAT AGA TT
ces F- TTG TTG GAA TTG TCG CAG AG
R-GTA AGC GGA CCT GTC TGT AAC AAC
Initial denaturation of 2 min at 94 °C, followed by 30 cycles at 94 °C for 30 s at, 52 °C for 1 min and 72 °C for 30 s and a final elongation at 72 °C for 10 min [13]
cytK-plcR P1- CAA AAC TCT ATG CAA TTA TGC AT
P3- ACC AGT TGT ATT AAT AAC GGC AAT C
[15]
tasA F- AGC AGC TTT AGT TGG TGG AG
R-GTA ACT TAT CGC CTT GGA ATTG
Initial denaturation of 5 min at 94 °C, followed by 40 cycles at 94 °C for 30 s, 59 °C for 45 s and 72 °C for 45 s, and final elongation at 72 °C for 5 min [11]
sipW F- AGA TAA TTA GCA ACG CGA TCTC
R- AGA AAT AGC GGA ATA ACC AAGC
Initial denaturation of 5 min at 94 °C, followed by 40 cycles at 94 °C for 30 s, 54 °C for 45 s, and 72 °C for 45 s, and a final elongation at 72 °C for 5 min