Table 1.
Gene | Primer Sequences | PCR Cycling Conditions | Reference |
---|---|---|---|
gyrB | F- GCC CTG GTA TGT ATA TTG GAT CTA C R- GGT CAT AAT AAC TTC TAC AGC AGG A |
Initial denaturation of 2 min at 94 °C, followed by 30 cycles at 94 °C for 30 s at, 52 °C for 1 min and 72 °C for 30 s, and final elongation at 72 °C for 10 min. | [12] |
nheABC | F- AAG CIG CTC TTC GIA TTC R- ITI GTT GAA ATA AGC TGT GG |
Initial denaturation of 5 min at 94 °C, followed by 30 cycles at 94 °C for 30 s, 49 °C for 1 min and at 72 °C for 1 min, and final elongation at 72 °C for 5 min | [13] |
hblABD |
F-GTA AAT TAI GAT GAI CAA TTT C R- AGA ATA GGC ATT CAT AGA TT |
||
ces |
F- TTG TTG GAA TTG TCG CAG AG R-GTA AGC GGA CCT GTC TGT AAC AAC |
Initial denaturation of 2 min at 94 °C, followed by 30 cycles at 94 °C for 30 s at, 52 °C for 1 min and 72 °C for 30 s and a final elongation at 72 °C for 10 min | [13] |
cytK-plcR |
P1- CAA AAC TCT ATG CAA TTA TGC AT P3- ACC AGT TGT ATT AAT AAC GGC AAT C |
[15] | |
tasA |
F- AGC AGC TTT AGT TGG TGG AG R-GTA ACT TAT CGC CTT GGA ATTG |
Initial denaturation of 5 min at 94 °C, followed by 40 cycles at 94 °C for 30 s, 59 °C for 45 s and 72 °C for 45 s, and final elongation at 72 °C for 5 min | [11] |
sipW | F- AGA TAA TTA GCA ACG CGA TCTC R- AGA AAT AGC GGA ATA ACC AAGC |
Initial denaturation of 5 min at 94 °C, followed by 40 cycles at 94 °C for 30 s, 54 °C for 45 s, and 72 °C for 45 s, and a final elongation at 72 °C for 5 min |