Table 1: Replication of rs200342067 association.
We replicated the association between rs200342067 and height in an independently collected cohort (N=598 individuals). We also tested the association of rs200342067 with inverse normally transformed height in two publicly available datasets of Hispanic/Latino individuals (PAGE and GIANT, N=31,214 and 10,776 individuals respectively) and observed a similar direction of effect and effect size in these independent cohorts. P-values are two-sided Wald test p-values. Numbers are rounded to two decimal places.
phenotype | cohort | N | rs | allele1 | allele2 | MAF (%) | effect size | se | z-score | Wald p-value |
---|---|---|---|---|---|---|---|---|---|---|
Height in cm | Discovery | 3,134 | rs200342067 | C | T | 4.72 | −2.22 | 0.36 | −6.17 | 6.8×10−10 |
Replication | 598 | rs200342067 | C | T | 4.52 | −1.70 | 0.82 | −2.07 | 0.04 | |
Meta-analysis | −2.14 | 0.33 | −6.48 | 9.2×10−11 | ||||||
inverse normally transformed height | Discovery | 3,134 | rs200342067 | C | T | 4.72 | −0.25 | 0.04 | −6.25 | 4.1×10−10 |
Replication | 598 | rs200342067 | C | T | 4.52 | −0.20 | 0.10 | −2.00 | 0.05 | |
PAGE | 31,214 | rs200342067 | C | T | 0.37 | −0.12 | 0.07 | −1.71 | 0.09 | |
GIANT | 10,766 | rs200342067 | C | T | 1.15 | −0.44 | 0.22 | −2.00 | 0.05 | |
Meta-analysis | −0.22 | 0.03 | −6.81 | 9.8×10−12 |