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. 2020 Aug 6;9:e57381. doi: 10.7554/eLife.57381

Table 2. List of primer sets.

For genotyping
Gene Sequence (5'→3') Accession number
Dyrk2 tm1b-WT Forward TGGGTCCAAATGCAAAGAAACGCCA NC_000076.6
Reverse GCTTCTCGTTCCGCACCATCTTCAG
Dyrk2 tm1b-KO Forward CCTTCTCCCTCCTCCACTCTGACCCA NC_000076.6
Reverse CCACACCTCCCCCTGAACCTGAAAC
For amplification of the probes for in situ hybridization or Southern blotting
Gene Sequence (5'→3') Accession number
Mouse Foxf2 Forward GAGATTAACCCTCACTAAAGGGAGGTTATGGTGGCCTCGACAT NM_010225.2
Reverse GAGTAATACGACTCACTATAGGGACACACACACCTCCCTTTTCA
Mouse Gli1 Forward GAGTATTTAGGTGACACTATAGAAGCAGGGAAGAGAGCAGACTG NM_010296.2
Reverse GAGTAATACGACTCACTATAGGGGCTGAGTGTTGTCCAGGTC
Mouse Ptch1 Forward GAGATTAACCCTCACTAAAGGGACATGGCCTCGGCTGGTAAC NM_008957.3
Reverse GAGTAATACGACTCACTATAGGGTGTACCCATGGCCAACTTCG
Southern for Dyrk2 Forward CTTCGAATCCTTTTATCCTTCAGGC NC_000076.6
Reverse ACATCATGTTCATTGGTTTTGCTCT
For cloning
Gene Sequence (5'→3') Accession number
Mouse Aurka CDS Forward GGACTCAGATCTCGAGACATGGCTGTTGAGGGCG NM_011497.4
Reverse GTCGACTGCAGAATTCCTAAGATGATTTGCTGGTTG
Mouse Dyrk2 CDS Forward GTGCGCGATCGCCATGTTAACCAGGAAACCTTCGGC NM_001014390.2
Reverse CTCCGTTTAAACGCTAACGAGTTTCGGCAACAC
For real-time PCR
Gene Sequence (5'→3') Accession number
Human DYRK2 Forward GGGGAGAAAACGTCAGTGAA NM_006482.3
Reverse TCTGCGCCAAATTAGTCCTC
Human HPRT1 Forward GGACTAATTATGGACAGGACTG NM_000194.3
Reverse GCTCTTCAGTCTGATAAAATCTAC
Mouse Aurka Forward CACACGTACCAGGAGACTTACAGA NM_011497.4
Reverse AGTCTTGAAATGAGGTCCCTGGCT
Mouse Cdc20 Forward GAGCTCAAAGGACACACAGC NM_023223.2
Reverse GCCACAACCGTAGAGTCTCA
Mouse Dyrk2 Forward CTACCACTACAGCCCACACG NM_001014390.2
Reverse TCTGTCCGTGGCTGTTGA
Mouse Foxf2 Forward AGCATGTCTTCCTACTCGTTG NM_010225.2
Reverse TCTTTCCTGTCGCACACT
Mouse Gli1 Forward GCACCACATCAACAGTGAGC NM_010296.2
Reverse GCGTCTTGAGGTTTTCAAGG
Mouse Hprt Forward CTCATGGACTGATTATGGACAGGAC NM_013556.2
Reverse GCAGGTCAGCAAAGAACTTATAGCC
Mouse Kif2c Forward GAGAGCAAGCTGACCCAGG NM_134471.4
Reverse CCTGGTGAGATCATGGCGATC
Mouse Plk1 Forward CCAAGCACATCAACCCAGTG NM_011121.4
Reverse TGAGGCAGGTAATAGGGAGACG
Mouse Ptch1 Forward CTCTGGAGCAGATTTCCAAGG NM_008957.3
Reverse TGCCGCAGTTCTTTTGAATG
Mouse Shh Forward GTGAAGCTGCGAGTGACCG NM_009170.3
Reverse CCTGGTCGTCAGCCGCCAGCACGC
Mouse Tpx2 Forward GCGAGGTTGTCAGGTGTGTA NM_001141977.1
Reverse TTGATAAAGTCGGTGGGGGC
Mouse Ube2c Forward CTGCTAGGAGAACCCAACATC NM_026785.2
Reverse GCTGGAGACCTGCTTTGAATA