Table 2.
Assembly statistics for the final draft genome and intermediate assemblies. 1. We estimated repeat content from a subset of contigs in the assembly (see Methods). n.d.: not determined.
| Short Read | Single Individual, Long Read | Pooled, Long Read | Combined, Long Read | Final Draft | |
|---|---|---|---|---|---|
| Assembly length (Gb) | 1.3 | 1.2 | 1.2 | 1.7 | 1.1 |
| N 50 | 53,046 | 4523 | 2958 | 5281 | 2681 |
| N50 length (kb) | 7.1 | 74.4 | 112.6 | 86.4 | 122.3 |
| Gaps (%) | 3.5 | 0 | 0 | 0 | 0 |
| GC content (%) | 30.6 | 31.3 | 31.4 | 31.4 | 31.3 |
| Complete, single-copy BUSCOs (%) | 32.7 | 72.2 | 71 | 69.2 | 78.8 |
| Complete, multiple-copy BUSCOs (%) | 17.2 | 7.5 | 5.9 | 17.4 | 5.1 |
| Minimum 1 repeat content (%) | n.d. | 71 | 71.4 | 71.4 | 71.3 |