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. 2020 Jul 7;25(13):3089. doi: 10.3390/molecules25133089

Table 9.

Energy scores for the complexes formed by the tested compounds 3ae and the reference colchicine in the active site of β-tubulin enzyme (PDB: 3HKC).

Compound S Score ΔG (kcal/mol)a Ligand–Receptor Interaction
Residue Type Length (Å)
Colchicine −5.62 −3.4
−0.5
Glu 71
Mg 601
H–donor
metal
3.16
2.61
3a −7.05 −2.2
−0.6
Mg 601
Ala 247
metal
pi–H
2.00
4.17
3b −7.16 −0.9
−2.3
−0.9
Asp 245
Arg 2
Glu 71
H–donor
H–acceptor
pi–H
3.27
3.41
3.98
3c −6.29 −1.8
−0.7
−0.7
Mg 601
Tyr 224
Ala 247
metal
pi–H
pi–H
2.40
3.79
4.50
3d −6.94 −1.0
−2.1
−0.7
Glu 71
Mg 601
Arg 2
H–donor
metal
pi–H
3.90
2.51
4.69
3e −6.43 −2.0
−2.2
Gln 11
Mg 601
H–acceptor
metal
3.09
2.33

ΔG (kcal/mol)a: the binding free energies.