Table 9.
Energy scores for the complexes formed by the tested compounds 3a–e and the reference colchicine in the active site of β-tubulin enzyme (PDB: 3HKC).
| Compound | S Score | ΔG (kcal/mol)a | Ligand–Receptor Interaction | ||
|---|---|---|---|---|---|
| Residue | Type | Length (Å) | |||
| Colchicine | −5.62 | −3.4 −0.5 |
Glu 71 Mg 601 |
H–donor metal |
3.16 2.61 |
| 3a | −7.05 | −2.2 −0.6 |
Mg 601 Ala 247 |
metal pi–H |
2.00 4.17 |
| 3b | −7.16 | −0.9 −2.3 −0.9 |
Asp 245 Arg 2 Glu 71 |
H–donor H–acceptor pi–H |
3.27 3.41 3.98 |
| 3c | −6.29 | −1.8 −0.7 −0.7 |
Mg 601 Tyr 224 Ala 247 |
metal pi–H pi–H |
2.40 3.79 4.50 |
| 3d | −6.94 | −1.0 −2.1 −0.7 |
Glu 71 Mg 601 Arg 2 |
H–donor metal pi–H |
3.90 2.51 4.69 |
| 3e | −6.43 | −2.0 −2.2 |
Gln 11 Mg 601 |
H–acceptor metal |
3.09 2.33 |
ΔG (kcal/mol)a: the binding free energies.