Table 1.
The nucleotide (nt) and amino acid (aa) sequence length (excluding gaps), the average pairwise nt and aa identity (%) and the base frequency of each individual Barmah Forest virus gene region within the 34-taxon dataset.
| Gene Region | Gene Region Length Excluding Gaps (nt/aa) | Pairwise Identity (nt/aa) (%) | Base Frequencies, A, C, G, T (%) |
|---|---|---|---|
| nsP1 | 1599/533 | 99.6/99.7 | 29.6, 24.7, 26.3, 19.4 |
| nsP2 | 2394/798 | 99.3/99.7 | 30.2, 25.3, 24.2, 20.4 |
| nsP3 | 1410/470 | 99.0/99.3 | 27.4, 26.1, 25.9, 20.6 |
| nsP4 | 1833/610 | 99.2/99.8 | 31.2, 21.9, 23.2, 23.7 |
| C | 762/254 | 99.4/99.7 | 32.7, 25.5, 24.0, 17.8 |
| E3 | 204/68 | 98.9/98.1 | 27.0, 29.1, 22.0, 21.9 |
| E2 | 1263/421 | 99.4/99.7 | 28.1, 27.2, 23.1, 21.7 |
| 6K | 174/58 | 98.9/99.7 | 21.5, 22.8, 23.3, 32.3 |
| E1 | 1320/439 | 99.6/99.8 | 27.3, 25.0, 24.1, 23.6 |