Table 1.

Summary of transcriptome sequencing

Sample no.	Total raw reads (M)	Total clean reads (M)	Bases	Q20 (%)	Q30 (%)	GC (%)
C-1	42504992 (42.5 M)	42450700 (42.45 M)	6298313539	97.69	93.38	43.36
C-2	39266402 (39.26 M)	39225018 (39.22 M)	5822251138	97.85	93.72	43.30
C-3	40480440 (40.48 M)	40438798 (40.43 M)	6002963474	97.35	92.64	43.26
D-1	39865584 (39.86 M)	39825266 (39.82 M)	5912995882	97.76	93.47	43.28
D-2	47778828 (47.77 M)	47730534 (47.73 M)	7091246545	97.46	92.89	43.17
D-3	47358562 (47.35 M)	47308692 (47.30 M)	7025370995	97.33	92.56	43.21

C-1, C-2, C-3: three replications of the control group leaves; D-1, D-2, D-3: three replications of the stress group leaves; Total raw reads: the number of reads before filtering; Total clean reads: the number of reads after filtering; Bases: total number of bases after filtration; Q: Q scores are used to measure base calling accuracy; GC: GC content