Table 5.
KEGG pathway annotation and number of DEGs
| Pathway category | Pathway ID |
DEGs with pathway annotation (1053) | All genes with pathway annotation (18047) | Qvalue |
|---|---|---|---|---|
| Pentose and glucuronate interconversions | ko00040 | 20 (1.90%) | 158 (0.88%) | 4.30E − 03 |
| Flavonoid biosynthesis | ko00941 | 11 (1.04%) | 64 (0.35%) | 4.01E − 03 |
| Linoleic acid metabolism | ko00591 | 16 (1.52%) | 103 (0.57%) | 1.44E − 03 |
| Photosynthesis—antenna proteins | ko00196 | 16 (1.52%) | 100 (0.55%) | 1.31E − 03 |
| MAPK signaling pathway-plant | ko04016 | 38 (3.61%) | 306 (1.70%) | 1.55E − 04 |
| Plant hormone signal transduction | ko04075 | 74 (7.03%) | 707 (3.92%) | 2.19E − 05 |
| Cutin, suberine and wax biosynthesis | ko00073 | 9 (0.85%) | 48 (0.27%) | 4.30E − 03 |
| Ubiquinone and other terpenoid-quinone biosynthesis | ko00130 | 17 (1.61%) | 146 (0.81%) | 1.58E − 02 |
| Isoquinoline alkaloid biosynthesis | ko00950 | 12 (1.14%) | 65 (0.36%) | 1.44E − 03 |
| Tropane, piperidine and pyridine alkaloid biosynthesis | ko00960 | 13 (1.23%) | 89 (0.49%) | 5.95E − 03 |
| Tyrosine metabolism | ko00350 | 18 (1.71%) | 149 (0.83%) | 9.15E − 03 |
| Biosynthesis of secondary metabolites | ko01110 | 281 (26.69%) | 3670 (20.23%) | 1.62E − 05 |
| Phenylpropanoid biosynthesis | ko00940 | 47 (4.46%) | 451 (2.5%) | 1.05E − 03 |
| Metabolic pathways | ko01100 | 486 (46.15%) | 7274 (40.31%) | 1.02E − 03 |
| Monoterpenoid biosynthesis | ko00902 | 6 (0.57%) | 31 (0.17%) | 1.36E − 02 |
| Zeatin biosynthesis | ko00908 | 6 (0.57%) | 25 (0.14%) | 4.50E − 03 |
| Sesquiterpenoid and triterpenoid biosynthesis | ko00909 | 4 (0.38%) | 21 (0.12%) | 4.36E − 02 |
| DNA replication | ko03030 | 20 (1.90%) | 166 (0.92%) | 6.12E − 03 |