Table 3.
HADHA | Molecular consequence | Reported citation or patogenic classification | ACADVL | Molecular consequence | Reported citation or pathogenic classification | ACADM | Molecular consequence | Reported citation or pathogenic classification | ETFDH | Molecular consequence | Reported citation or pathogenic classification | ACADS | Molecular consequence | Reported citation or pathogenic classification | SCL22A5 | Molecular consequence | Reported citation or pathogenic classification | CPT2 | Molecular consequence | Reported citation or pathogenic classification |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
c.1528G > C p.Glu510Gln | missense | Piekutowska-Abramczuk et al. 2010 [40] | c.1269 + 1G > A | splicing donor | Hoffmann et al. 2012 [26] | c.817_829del p.Ala273Leufs*7 | nonsense | Likely pathogenic, ExAC 0.00001 | c.524G > A p.Arg175His | missense | Yotsumoto et al. 2008 [37] | c.625G > A p.Gly209Ser | missense | common variant known to confer susceptibility to develop SCADD, Gallant et al. 2012 [35] | c.820_821del p.Trp274Valfs*5 | frameshift | Likely pathogenic, Exac - | c.338C > T p.Ser113Leu | missense | Fanin et al. 2012 [55] |
c.1096C > T p.Arg366Cys | missense | Miller et al. 2015 [29] | c.388-14A > G | splicing | Likely pathogenic, ExAC 0.00008 | c.1387G > C p.Gly463Arg | missense | likely pathogenic, ExAC - | c.1054G > A p.Ala352Thr | missense | Tonin et al. 2016 [43] | c.1048_1052 + 5delCTGTGGTATG | deletion causes frameshift | Likely pathogenic, Exac - | ||||||
c.604C > G p.Leu202Val | missense | Miller et al. 2015 [29] | c.244insT | frameshift | Andresen et al. 2001 [42] | c.1448C > T p.Pro483Leu | missense | Olsen et al. 2007 [33] | c.531G > A p.Trp177* | nonsense | Tonin et al. 2016 [43] | c.254_264dupGGCTCGCCACC p.Ile89GlyfsTer45 | duplication causes frameshift | Shibbani et al. 2014 [48] | ||||||
c.848 T > C p.Val283Ala | missense | Goetzman et al. 2007 [41] | c.978G > A p.Met326Ile | missense | likely pathogenic, ExAC - | c.814G > A p.Gly272Arg | missense | Chen et al. 2018 [34] | c.765G > T p.Gly255Gly | synonymous | Tonin et al. 2016 [43] | c.1396A > G p.Ser466Gly | missense | Likely pathogenic, Exac - | ||||||
c. 1500_1502del p.Leu502del | deletion | Bouvier et al. 2016 [28] | c.985A > G p.Lys329Glu | missense | Gramer et al. 2015 [30] | c.940G > A, p.Glu314Lys | missense | likely pathogenic, ExAC - | c.529 T > C p.Trp177Arg | missense | Pedersen et al. 2008 [44] | c.136C > T p.Pro46Ser | missense | Filippo et al. 2011 [49]; Rasmussen et al. 2014 [50] | ||||||
c.30 + 1G > T | splicing | ExAC -, alteration of splicing site by Alternatve Site Splicing Predictor and Human Splicing Finder softwares | c.521 T > C, p.Val174Ala | missense | likely pathogenic, ExAC - | c.988C > T p.Arg330Cys | missense | van Maldegem et al. 2006 [45] | c.394-16 T > A | splicing | Rose et al. 2012 [51] | |||||||||
c.387del p.Gln130Lysfs*20 | frameshift | likely pathogenic, ExAC - | c.1531G > A p.Asp511Asn | missense | Macchione et al. 2019 [22] | c.815G > A p.Arg272His | missense | van Maldegem et al. 2006 [45] | c.667_69del TTC p.Phr23del | deletion | Lamhonwah et al. 2002 [52] | |||||||||
c.31-1G > A | splicing | ExAC -, alteration of splicing site by Alternatve Site Splicing Predictor and Human Splicing Finder softwares | c.560C > T p.Ala187Val | missense | Macchione et al. 2019 [22] | c.1156C > T p.Arg386Cys | missense | Merinero et al. 2006 [46] | c.254_264dup p.Ile89GlyfsX45 | duplication cause premature stop codon | Wang et al. 2001 [53] | |||||||||
c.136C > T p.Arg46Trp | missense | Pedersen et al. 2003 [47] | c.400C > G p.Leu134Val | missense | likely pathogenic, ExAC - | |||||||||||||||
c.338G > A p.Cys113Tyr | missense | Wang et al. 2014 [54] |
Molecular consequences (synonymous, missense, nonsense, splicing) are described; for each variant the citation, if the variant was already reported in literature, or the pathogenic classification by in silico prediction analysis with Exome Aggregation Consortium (ExAC) Browser allele frequency are reported.