Table 2.
HLA Allele# | Position* | OR | 95% CI | P Value |
---|---|---|---|---|
HLA-B*27 | 31431272 | 2.35 | 2.08-2.66 | 1.86 × 10−42 |
HLA-B*2705 | 31431272 | 2.27 | 2.02-2.56 | 1.49 × 10−41 |
HLA-C*02 | 31346171 | 1.33 | 1.21-1.45 | 3.37 × 10−9 |
HLA-C*0202 | 31346171 | 1.33 | 1.21-1.45 | 3.37 × 10−9 |
HLA-C*01 | 31346171 | 1.25 | 1.14-1.38 | 4.26 × 10−6 |
HLA-C*0102 | 31346171 | 1.25 | 1.14-1.38 | 4.26 × 10−6 |
HLA-DRB1*0103 | 32660042 | 1.34 | 1.14-1.57 | 0.00044 |
HLA-DRB1*1501 | 32660042 | 1.23 | 1.09-1.39 | 0.00074 |
HLA-C*0701 | 31346171 | 0.82 | 0.72-0.92 | 0.00078 |
HLA-B*4402 | 31431272 | 0.79 | 0.68-0.91 | 0.0011 |
HLA-C*05 | 31346171 | 0.80 | 0.70-0.91 | 0.0011 |
HLA-C*0501 | 31346171 | 0.80 | 0.70-0.91 | 0.0011 |
HLA-DQB1*0602 | 32739039 | 1.22 | 1.08-1.38 | 0.0018 |
HLA-DRB1*15 | 32660042 | 1.21 | 1.07-1.37 | 0.0018 |
HLA-B*08 | 31431272 | 0.81 | 0.71-0.93 | 0.0023 |
HLA-B*0801 | 31431272 | 0.81 | 0.71-0.93 | 0.0023 |
HLA-B*44 | 31431272 | 0.84 | 0.75-0.95 | 0.0051 |
Adjusting for the HLA-B*27 allele | ||||
HLA-DRB1*15 | 32660042 | 1.28 | 1.13-1.45 | 8.14 × 10−5 |
HLA-B*07 | 31431272 | 1.30 | 1.13-1.50 | 0.00023 |
HLA-DPB1*03 | 33157346 | 1.16 | 1.04-1.29 | 0.0088 |
Adjusting for both HLA-B*27 and HLA-DRB1*15 allele | ||||
HLA-DPB1*03 | 33157346 | 1.17 | 1.05-1.31 | 0.0048 |
OR, odds ratio; 95% CI, 95% confidence interval.
UCSC, human genome build 19.
HLA allele is imputed using SNP2HLA.