Table 2.
RVS results of EF1% on five Class A GPCRs in DUD-E Dataset. Values outside (and inside) parentheses are the results for MAGELLAN with (and without) homology constraint cutoffs. Data for PoLi was taken from Roy et al. [5] and data for FINDSITECcomb2.0 (FSc2.0) was downloaded from the authors’ webserver.
| Gene | UniProt ID | MAGELLAN | PoLi | FSc2.0 | AutoDock | AutoDock Refined | Dock6 |
|---|---|---|---|---|---|---|---|
| AA2AR | P29274 | 0.95 (39.03) | 1.2 | 0 | 1.42 | 4.03 | 2.86 |
| ADRB1 | P07700 | 5.47 (36.11) | 2.0 | 3.24 | 0.66 | 0.88 | 2.63 |
| ADRB2 | P07550 | 13.68 (34.75) | 2.6 | 5.20 | 2.69 | 0.90 | 1.35 |
| CXCR4 | P61073 | 0 (23.97) | 0 | 2.53 | 0 | 0 | 2.49 |
| DRD3 | P35462 | 28.65 (39.27) | 5.2 | 3.54 | 2.64 | 1.37 | 1.26 |
| Average | 9.75 (34.63) | 2.2 | 2.90 | 1.48 | 1.44 | 2.12 |