Table 1.
Kinetic parameters of Hv and mHv proteins binding with receptors and mutants from SPRi
|
No. |
analytes |
ligands |
Avg ka |
Avg kd |
Avg KD |
Interactions |
ABS (tr_KD) |
|---|---|---|---|---|---|---|---|
|
(1/Ms) |
(1/s) |
(M) |
intensity |
||||
|
1 |
SLAM |
Hv |
8.88E+02 |
9.59E-04 |
1.08E-06 |
Strong |
19.8205 |
|
2 |
Nectin 4 |
Hv |
1.42E+03 |
4.35E-04 |
3.06E-07 |
Strong |
21.6395 |
|
3 |
mSLAM1 |
Hv |
1.78E+01 |
5.06E-02 |
2.85E-03 |
Weak |
8.4558 |
|
4 |
mSLAM2 |
Hv |
8.45E+01 |
4.41E-03 |
5.22E-05 |
Middle |
14.2250 |
|
5 |
mSLAM3 |
Hv |
7.21E+00 |
2.34E-01 |
3.25E-02 |
VW/None |
4.9432 |
|
6 |
mNectin 4 |
Hv |
6.21E+02 |
1.11E-03 |
1.79E-06 |
Strong |
19.0881 |
|
7 |
Hv |
Hv |
1.81E+01 |
5.14E-02 |
2.83E-03 |
Weak |
8.4626 |
|
8 |
PBS |
Hv |
1.30E+00 |
2.80E-01 |
2.16E-01 |
VW/None |
2.2111 |
|
9 |
SLAM |
mHv |
4.29E+00 |
1.33E-01 |
3.09E-02 |
VW/None |
5.0177 |
|
10 |
Nectin 4 |
mHv |
9.85E+01 |
2.08E-03 |
2.11E-05 |
Middle |
15.5312 |
|
11 |
mSLAM1 |
mHv |
5.64E+00 |
1.58E-01 |
2.80E-02 |
VW/None |
5.1585 |
|
12 |
mSLAM2 |
mHv |
1.37E+01 |
3.52E-01 |
2.56E-02 |
VW/None |
5.2851 |
|
13 |
mSLAM3 |
mHv |
2.99E+00 |
3.29E-01 |
1.10E-01 |
VW/None |
3.1839 |
|
14 |
mNectin 4 |
mHv |
1.81E+01 |
7.21E-02 |
3.99E-03 |
Weak |
7.9697 |
|
15 |
mHv |
mHv |
1.87E+01 |
4.61E-02 |
2.47E-03 |
Weak |
8.6604 |
|
16 |
PBS |
mHv |
1.95E+00 |
1.82E-01 |
9.33E-02 |
VW/None |
3.4220 |
Interaction intensity level: 10−13–10−8, very strong; 10−8–10−5,strong; 10−5–10−3, medium; 10−3–2×10−2,weak; 2×10−2–102, very week (VW)/ none).
Avg k a, average association rate constant; Avg k d, average dissociation rate constant; Avg K D, average equilibrium dissociation constant (k d /k a); ABS (tr_ K D), absolute affinity coefficient [log2(K D)].