Table 1.
h2g of severe malaria resistance determined by GCTA and PCGC methods
| Population | SNPs (n) | Samples (n) | h2 g-GCTA (%) | h2 g-PCGC (%) |
|---|---|---|---|---|
| Gambia | 1 513 822 | 4128 | 0.20(se = 0.05) | 0.20(se = 0.05) |
| Kenya | 1 579 227 | 2062 | 0.20(se = 0.05) | 0.16 (se = 0.05) |
| Malawi | 1 502 462 | 2418 | 0.17(se = 0.05) | 0.23(se = 0.06) |
| Mandinka | 1 513 822 | 1281 | 0.24 (se = 0.06) | ne* |
| Chonye | 1 579 227 | 637 | 0.20(se = 0.06) | ne* |
| Giriama | 1 579 227 | 1173 | 0.19 (se = 0.06) | ne* |
ne*: Model did not fit because of small sample size and there was no reliable estimation
SNP: single nucleotide polymorphisms, h2g-GCTA: h2g estimated using GCTA method, h2g PCGC: h2g estimated using PCGC method