Skip to main content
. 2020 Jul 10;11:1587. doi: 10.3389/fmicb.2020.01587

TABLE 4.

Indicator species analysis of the prokaryotic ASV residing in the rhizosphere of canola in response to cropping diversification treatment in 2013 and 2016.

2013
2016
Crop diversification1 Indicator species ASV Closest identity P value Indicator species ASV Closest identity P value
Monoculture ASV315 Thermomicrobiales 0,003** ASV399 Acidobacteria sp. 0,002**
ASV833 Paracoccus sp. 0,001** ASV202 Thermomicrobiales 0,003**
ASV380 Chloroflexi sp. 0,003** ASV309 Actinobacteria sp. 0,002**
ASV409 Haliangium sp. 0,010* ASV576 Thermomicrobiales 0,007**
ASV16 Intrasporangiaceae 0,026* ASV276 Chloroflexi sp. 0,002**
ASV1082 Thermomicrobiales 0,031* ASV848 Micromonosporaceae 0,009**
ASV280 Chthoniobacter sp. 0,042* ASV119 Rhizobiaceae 0,013*
ASV251 Chthoniobacter sp. 0,042* ASV547 Chloroflexi sp. 0,003**
ASV838 Rhodanobacteraceae 0,049* ASV680 Tepidisphaera sp. 0,009**
ASV334 Rhizobiaceae 0,015*
ASV809 Planctomycetes 0,020*
ASV315 Thermomicrobiales 0,022*
ASV321 Thermomicrobiales 0,034*
ASV460 Chloroflexi sp. 0,032*
ASV60 Gaiella sp. 0,037*
ASV142 Chthoniobacter sp. 0,030*
ASV181 Tepidisphaerales 0,034*
ASV629 Solirubrobacter sp. 0,025*
ASV552 Pseudonocardia sp. 0,036*
ASV137 Rubinisphaeraceae 0,045*
ASV613 Chloroflexi sp. 0,043*
ASV108 Thermomicrobiales 0,039*
ASV463 Parafilimonas sp. 0,041*
ASV227 Acidobacteria 0,045*
ASV183 Chitinophagaceae 0,047*
ASV1287 Pirellula sp. 0,047*
Low ASV529 Rubrobacter sp. 0,015* ASV501 Pyrinomonadaceae 0,001**
ASV577 Streptosporangium sp. 0,008**
ASV377 Lysobacter sp. 0,030*
ASV697 Frankiales 0,036*
Medium ASV1624 Acidobacteria 0,033*
High ASV182 Pseudomonas sp. 0,002**
ASV214 Gaiellales 0,009**
ASV34 Gaiella sp. 0,012*
ASV283 Haloactinopolyspora sp. 0,014*
ASV498 Rhizobiales 0,014*
ASV624 Bacteria 0,017*
ASV93 Nitrososphaeraceae 0,016*
ASV751 Acidobacteria 0,003**
ASV59 Holophagae sp. 0,027*
ASV24 Burkholderiaceae 0,027*
ASV53 Nitrososphaeraceae 0,025*
ASV248 Iamia sp. 0,029*
ASV127 Acidobacteria 0,046*
ASV262 Sphingomonas sp. 0,040*
ASV302 Acidobacteria 0,048*

Indicator values (IndVal) were tested for significance by Monte Carlo permutation tests (α = 0.05, 999 permutations). 1Monoculture, canola monoculture; Low, wheat-canola rotation; Medium, pea-barley-canola rotation; High, lentil-wheat-LL-pea-barley-RR. An empty row indicates the absence of indicator species. 2ASV in bold are indicator species found in 2013 and 2016 in the same crop diversification. Level of significance, *p < 0.05, **p < 0.01.