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[Preprint]. 2020 Aug 4:rs.3.rs-51964. [Version 1] doi: 10.21203/rs.3.rs-51964/v1

Table 8:

Number of TCRs bound per target in the peptide MIRA panel

Field Value Notes
TCR BioIdentity String Represents the overall protein sequence of a T cell receptor. This is defined as the identified V gene, the amino acid sequence of the CDR3 region and the identified J gene. Two rearrangements with the same bioidentity would be expected to demonstrate the same binding and activation behavior. Data Format: [Amino Acid]+[v_gene]+[j_gene]
TCR Nucleotide Sequence String The unique TCRB sequence identified as binding to the target.
Experiment String The experiment in which the binding was observed (joins to the subject-metadata.csv file).
ORF String The ORF in which this minigene target is located.
ORF Genebank ID String The identifier for the sequence from which the target was selected.
Amino Acid String The protein sequence of the minigene target.
Start Index in Genome Integer The 1-based index of the first base of the target within the genome.
End Index in Genome Integer The 1-based index of the last base of the target within the genome.