Table 3.
Pairwise comparison of shared loci between the F0 and F1 in terms of family and methylation state: All values are P values from Dunn’s test of multiple comparison
| Comparison | F0 M | F0 P | F0 M + P | F1 |
|---|---|---|---|---|
| Entukura–Enzirabahima 1 | 1.0000 (+/−) | 1.0000 (+/−) | 0.6072 (+/−) | 0.0558 (−/+) |
| Entukura–Enzirabahima 2 | 1.0000 (+/−) | 1.0000 (+/−) | 0.8655 (+/−) | 0.1551 (−/+) |
| Enzirabahima 1–Enzirabahima 2 | 1.0000 (+/−) | 1.0000 (−/+) | 0.8655 (−/+) | 0.5563 (+/−) |
| mCmCGG–CCGG | 1.0000 (−/+) | 1.0000 (+/−) | 0.5641 (+/−) | 0.8462 (−/+) |
| mCmCGG–CmCGG | 1.0000 (−/+) | 1.0000 (−/+) | 0.1045 (+/−) | 0.8712 (−/+) |
| mCmCGG–mCCGG/i-CmCGG | 0.6775 (−/+) | 1.0000 (−/+) | 0.1177 (+/−) | 1.0000 (−/+) |
| CCGG–CmCGG | 1.0000 | 1.0000 (−/+) | 1.0000 (−/+) | 1.0000 (+/−) |
| CCGG–mCCGG/i-CmCGG | 1.0000 (−/+) | 0.9374 (−/+) | 1.0000 (+/−) | 1.0000 (+/−) |
| CmCGG–mCCGG/i-CmCGG | 1.0000 (−/+) | 1.0000 (−/+) | 1.0000 (−/+) | 1.0000 (−/+) |
(+/−) indicates that a larger portion of the former group of the comparison is shared with the loci type in question than the latter, while (−/+) indicates the reverse. F0 M—loci that match exclusively to the F0 mother, F0 P—loci that match exclusively to the F0 father, F0 M + P—loci that match to both F0 mother and F0 father, F1—de novo loci in the F1 progeny